| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0413 |
|---|
| Symbol | |
|---|
| ID | 5328086 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 417739 |
|---|
| End bp | 419910 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640792934 |
|---|
| Product | heavy metal translocating P-type ATPase |
|---|
| Protein accession | YP_001329633 |
|---|
| Protein GI | 150402339 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2217] Cation transport ATPase |
|---|
| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGTAA AACTAAAAAT TTCCGGAATG ACTTGTGCAG TCTGTGTAAA AACCATTGAA
AAATCTGTTT CAAAGATGGA CGGTGTTGAT AAAATTGTTG TAAATTTACT GGATGAAAGC
GCAGTTATCA ATTTTAATCC AGACATCGTT AGTATCGAAG ACATCTGGAT AAAAATTGAA
AGGTTTGGCT ATGAAGTTCT CGGGATTGCA GAAGAAGTTG AAGAACTGCC TAAAAAAGAA
GAGGAACTTA AAGAAAAGCT TGGCAAAATA ATTTTTGGGA CAGTTTTCTC AATCGCACTA
TTTTCAATTA TGTATCTAAA AATTCCATAT AAACCATATT TGGCATTTTT AATCTCAATT
CCACCTTTGA TATACATTGC ACTCCCAATT TTTAAAGCAG GGTTTAATTC TCTTAAAATC
AAATCGCTAA ACATGGATGT TATGTATTCT CTTGGAATGG GGGTTGCATA CATTTCAGCA
TTACTTGTAA CGTTAGGAAT TCTTCCAATG AACTTCATGT TTTATGATAC GACAATAATG
CTTGCGACAC TTTTAACCCT TGGTAGATAT TTAGAAGAGC GTGCGAAGGG CAGAACCTCC
GAAGCGATTA AAAAACTAAT GGGTTTACAG GTAAAAACTG CAAAAGTTAT TAAAAATAAC
GAAGAATTTG AAATTCCAAT CGAAGACGTG ATTGTTGGAG ATATTATTTT GATTCGTCCC
GGGGAAAAGA TTACAGTTGA TGGAACTGTT TTTGAAGGAG TTTCTTACGT TGATGAATCG
ATGATTACCG GAGAACCAAT TCCTATTGCA AAGAAAAAAG GAGATTCTGT AATTGGGGGA
ACGATAAATA AAAATGGAAT TTTAAAAATA ACTGCTGAAA AAATTGGAAA AGATACAATA
TTGTCACAAA TCATCCTGCT TGTTAAAAAT GCCCAACTTT CAAAACCAGA TATCCAAAAT
TTAGCAGATA AGGCAGTTTC GTACTTTATA CCAACAGTAT TTACAATTGC ACTTATTTCT
TCAGTATTTT GGTTTTTTAA CGGCGGAATT TTACTTGCAG TGACTACATT TATTTCTGTA
ATGGTGATTG CGTGTCCCTG TGCCCTTGGA CTTGCAACAC CTACTGCAAT AACAGTTGGA
GTTGGACGCG GAGCTGAACT TGGCATTTTG ATTAAAGATA GCAAGGTATT TGATGTTGCA
GGAAACCTCA AATGCATGAT TTTTGATAAA ACTGGAACCA TTACAAAAGG AAAACCCGAT
GTTGATGAAA TAATTTCTGA TTATTCCAAA GAAGAACTTT TATTAATTGC GGGCTCGCTT
GAAAAAAACT CTGAACATCC ACTAGCACTT GCAATTGTTA AAAAAGCGAA TGAATTAAAT
ATTTCACTTT CTGAACCTGA AAAATTTGAA TCAATTACTG GAATGGGTGT TTCTGGAATA
TTGAAAGATC AGAAGGTTTT CATTGGAAAC CGGCGACTTA TGGAAGAAAA TAATCTTTCA
ATAAATGAAC ATTATATTGT AGAAATATCC AGATTAGAAG AAAATGCAAA AACCGTCATC
ATTGTTGCTA TTGAAAACAA AATAATGGGA ATAATTGCAA TATCTGATAA AATAAAAGAA
AATGCAAAAA TTACAGTTCA AAATTTACGT GAAATGGGAA TTGAATCCTA TATGATTACA
GGAGACAATG AAAAAACTGC AAAAGTTATC GGAAAAGAAG TTGGTATTTT AGAAAATCAC
GTATATTCAA ATGTTTTACC TGAAAAAAAG GCTGAAATTG TTAAATGGAT TAAAGAAAAT
GCCGGCGGAT ACGTTGAATT CATTGGAGAT GGAATAAATG ATGCTCCAGC ACTTTCTACG
GCAGATGTTG GAATTGCAGT TGGAAGCGGA ACAGATATTG CAATTGAAAG TGGTGAAGTC
GTTTTAATGA ATGATGATTT GAGTTATGTT ACAGGATTTG TAAAATTGAG TAAAAGGGTA
TTGAAACAGA TAAAATTAAA TTTGTTCTGG GCTTTTGCAT ACAACTCAAT TTTAATTCCT
GTTGCTGCCG GCGCCCTTTA TTCATATAAT ATTAAATTTG AACCCGAACT TGCAGCATTT
GCAATGACGT TAAGCTCCTT AACCATAATT GGATTGTCAT TGCTTTTAAA AAGATACGAT
CCTTGGAAAT AA
|
|---|
| Protein sequence | MEVKLKISGM TCAVCVKTIE KSVSKMDGVD KIVVNLLDES AVINFNPDIV SIEDIWIKIE
RFGYEVLGIA EEVEELPKKE EELKEKLGKI IFGTVFSIAL FSIMYLKIPY KPYLAFLISI
PPLIYIALPI FKAGFNSLKI KSLNMDVMYS LGMGVAYISA LLVTLGILPM NFMFYDTTIM
LATLLTLGRY LEERAKGRTS EAIKKLMGLQ VKTAKVIKNN EEFEIPIEDV IVGDIILIRP
GEKITVDGTV FEGVSYVDES MITGEPIPIA KKKGDSVIGG TINKNGILKI TAEKIGKDTI
LSQIILLVKN AQLSKPDIQN LADKAVSYFI PTVFTIALIS SVFWFFNGGI LLAVTTFISV
MVIACPCALG LATPTAITVG VGRGAELGIL IKDSKVFDVA GNLKCMIFDK TGTITKGKPD
VDEIISDYSK EELLLIAGSL EKNSEHPLAL AIVKKANELN ISLSEPEKFE SITGMGVSGI
LKDQKVFIGN RRLMEENNLS INEHYIVEIS RLEENAKTVI IVAIENKIMG IIAISDKIKE
NAKITVQNLR EMGIESYMIT GDNEKTAKVI GKEVGILENH VYSNVLPEKK AEIVKWIKEN
AGGYVEFIGD GINDAPALST ADVGIAVGSG TDIAIESGEV VLMNDDLSYV TGFVKLSKRV
LKQIKLNLFW AFAYNSILIP VAAGALYSYN IKFEPELAAF AMTLSSLTII GLSLLLKRYD
PWK
|
|---|
| |