Gene MmarC7_0310 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0310 
Symbol 
ID5328455 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp323841 
End bp325043 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content35% 
IMG OID640792831 
Producthypothetical protein 
Protein accessionYP_001329531 
Protein GI150402237 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03266] putative methanogenesis marker protein 1
[TIGR03604] bacteriocin biosynthesis docking scaffold, SagD family 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAATG ACATTAACTA TACTCTTGCA GCTTATAGAA TCTGCACCCC TGAAGAAACT 
TTTGAAAAAA TAGAACCGAT AATAAAGGAA ATCGGTGTTA CAAGAACTGC GAGAATTGAT
GGACTTGATA GAATTGGAAT TCCTGTTTTT TCATCGATTA GACCTTCTGC AAAAGAGGGT
GCAATCAGCG TATATGCTGG AAAAGGTGCT ACTGAAATTC AAGCAAAAGT TTCATCCACG
ATGGAAGCAA TTGAGAGGTA TTCTGCGGAA TTTGACGAAA AATCAAAACT CGAAATTACA
AAAGCACCAG AAAACCCCGT AAACTTGGAT GATTTAATTT TACCGGATGG AAAAAGTGCA
GAATATATAG ATACTGATGG AATTGAATGG GTATATGGGA AAGATATTAT CAGCGGAAAA
ACCTTTGAAG TTCCAATAAA CAGTGCTGTT CACCCGCATG ACGGAAAAAA ATTATTTAGA
AGTAATACCA ATGGTCTTGC ATCTGGAAAC TCTGAAGAAG AAGCAGTTTT TCACGGAATG
CTTGAGGTAA TCGAAAGGGA TGCATGGAGT ATCTCAGAAC TTTCAAAAAA CACGTATAAA
AAGTTAAATG TTGAAAATGC GAAAAATCCA TTAATTTTTG AACTCCTTGA AAAATTTAAA
AAAGCGAAAG TAAACATCAT CTTAAAAGAT TTGACAAGCG AAGTTGGAAT TCCAACAATT
GCGGCAATTT CAGACGATGA TGTGTTAAAA GACCCTGCAC TTTTATGTAT GGGCGTTGGA
TGCCATTTAC ACCCGGAAAT TGCAGTTTTG AGAGCATTAA CCGAAGTTGC ACAGAGCAGA
GCAACACAAA TCCACGGGGC ACGGGAAGAT ACAAATCGGG GAGATGTCGT AAGAAGAATA
AGTTATGACA GGCTGAAAAG AGCACATAAA AAGTGGTATA GTTTTAAAAA TGAGATAAAC
ATTGAAGATA TGCCGAATGA AGCAAAATTA AATCTTAAAA AAGACATTGA AACAGTTAAA
AGTACACTAA AACAGCACGG TTTTGATAAA ATCATAACTG TTAAATTAAA TAAAACTGAA
ATCGATGTTT CAAGAGTTAT TATTCCGAAA ATGGAAATGT ACAGCGTTGA TAGAGATAGA
ATTTCACTCT GGATTAAAGA TAGGATTAGA AGAAACCTTG AAAGTAATTT AAATTTAATT
TAA
 
Protein sequence
MENDINYTLA AYRICTPEET FEKIEPIIKE IGVTRTARID GLDRIGIPVF SSIRPSAKEG 
AISVYAGKGA TEIQAKVSST MEAIERYSAE FDEKSKLEIT KAPENPVNLD DLILPDGKSA
EYIDTDGIEW VYGKDIISGK TFEVPINSAV HPHDGKKLFR SNTNGLASGN SEEEAVFHGM
LEVIERDAWS ISELSKNTYK KLNVENAKNP LIFELLEKFK KAKVNIILKD LTSEVGIPTI
AAISDDDVLK DPALLCMGVG CHLHPEIAVL RALTEVAQSR ATQIHGARED TNRGDVVRRI
SYDRLKRAHK KWYSFKNEIN IEDMPNEAKL NLKKDIETVK STLKQHGFDK IITVKLNKTE
IDVSRVIIPK MEMYSVDRDR ISLWIKDRIR RNLESNLNLI