Gene MmarC7_0117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC7_0117 
Symbol 
ID5328696 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C7 
KingdomArchaea 
Replicon accessionNC_009637 
Strand
Start bp135137 
End bp135574 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content37% 
IMG OID640792638 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_001329338 
Protein GI150402044 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.515188 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTGATT TTATGGACGA AGCAATAAAA GAAGCTAAGC TGGGACTTAA AGAAGGCGGA 
ATTCCTATCG GCGCAGTTTT GGTTTATAAA AATAAAATTA TTGGCCGAGG ACACAACAGA
CGGGTTCAAA ATAACAGCGC AATTTTGCAC GCTGAAATGG ACGCGCTTGA AAATGCAGGA
AGGCTAACTT CAGACGTTTA TAGAAATTGC GAACTCTACA CAACACTTTC GCCCTGCATC
ATGTGCAGTG GCGCAGTTTT GCTTTACAAA ATTAAAAAAG TAGTGATCGG AGAAAATAAA
ACTTTTTTAG GTGCAGAAGA CCTGTTGTTA AAAAATGGAG TCGCTGTTGA AGTTTTAAAT
GATGAAAGAT GCGTAAAAAT GATGAAAGAT TTTATAAAAA ATAACCCAAA ATTATGGAAT
GAAGATATCG GAGAATAA
 
Protein sequence
MTDFMDEAIK EAKLGLKEGG IPIGAVLVYK NKIIGRGHNR RVQNNSAILH AEMDALENAG 
RLTSDVYRNC ELYTTLSPCI MCSGAVLLYK IKKVVIGENK TFLGAEDLLL KNGVAVEVLN
DERCVKMMKD FIKNNPKLWN EDIGE