| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC7_0103 |
|---|
| Symbol | |
|---|
| ID | 5328194 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C7 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009637 |
|---|
| Strand | + |
|---|
| Start bp | 119381 |
|---|
| End bp | 120823 |
|---|
| Gene Length | 1443 bp |
|---|
| Protein Length | 480 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640792624 |
|---|
| Product | nitrogenase MoFe cofactor biosynthesis protein NifE |
|---|
| Protein accession | YP_001329324 |
|---|
| Protein GI | 150402030 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains |
|---|
| TIGRFAM ID | [TIGR01283] nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
[TIGR01862] nitrogenase component I, alpha chain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.21101 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.23619 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTTTGA ACCTTGATAC AGAAAACCGG AAAACGCAAA ATGGAAATAA CTGTGATGAT
TTTGACATAG AAGTCAAAAT CCCAAAATCC ATTTTCGAAA AATTAAAATC TATTGAAGCG
TTAAAAGCCC GAGAATCGCA AATGTGTATT TCGGGAAAAG ACGATTCAAT TCCTACATGT
GACAAAAACT CGACCCCAGG TATAATTACC CAGAGATCCT GTGTATACGG GGGAGCAAGA
GTTGTTCTGA TGCCTATAAC TGATGCAGTA CATCTCGTAC ACGGGCCAGT AGGCTGCGCA
GCATGCACTT GGGATATTCG TGGAAGTAAA TCTACAGGAG ATAAACTTTA TAAAAACGGA
TTCACAACTG ATTTGCAGGA ATCAGATATT GTATTTGGAG GGGAAAAAAA GCTTTATGAA
TCCATTCTGG AAGTACATAA GCTTTACAGC CCTGGTGCAA TATTTGTTTA CTCCACTTGC
GTAGTAGGCT TGATTGGAGA TGATATCAAA GCAGTTTGTA AACAGGCAGA AGAAGCAACA
GGTTGTAGAG TTATTCCGGT ACAGTCAGAA GGGTTCAAAA GCTTTAATAA ATCTGCAGGT
CACAAACTCG CATGTGACGC AATGCTTGAC TATTTAATTG GCACAGAAGA GCCAGAAGAA
GAGCACCCTT ACAGTATTAA TATAATTGGA GAATTCAATG TTGCAGGAGA CCTCTGGGGA
ATTATTCCAT TATATGAAAA AATGGGTGTA AAAGTACACA CTGCAATTAC TGGAGACTCA
ACTGTCAAAA AAGTTGCAAG TGCGCACAGA TCTAAATTAA ATATAGTCCA ATGTCAAAAA
TCATCTAATT ACTTAGCTGC CCAAATGCAG AAGAAATACG GAATACCTAA CCTCAAAGTG
AATTTCTTTG GAATCGACGA AACTACAAAG TCCTTAAGGG CAGTTGCAGA ATTTTTCGGT
GACGAAGAAA TGATTAAAAA AACCGAAGAA TTGATAAAAT CAGAAGTTAA AAATCTTCGA
GATGAAATTT CGGAATACAA AAAAGATCTA GCTGGTAGTA CTGTTGCGAT ATATTCCGGA
GCCCACAAAT CTTGGGCACT GGTAAGCGCA TTTGGTGAAC TCGACATGGA AATTATCATG
AGCGGTACCC AAAACGGAAA GCCAGAAGAT TACCAAAAAA TCAGAGAGCA TGTCAATGAA
GGTACATTAA TTGTAGACGA TGCAAGTTCA ATGGAACTTG TACAACTTCT CAAAGAATAC
AAACCTGATA TATTAATTTC TGGAGCTAAA GAAAAATATC TATCCCTGAA AAGTGGAGTT
CCTCACTGTG ATTTCAATCA CGACAGGATA ACTGCATTCT CAGGTTTTCA GGGTTTCATA
AATTTTGCAA GAGTTGTACA TACCGCAGTT ATGACGCCAG TGTGGAAACT TTCTAGAAAA
TGA
|
|---|
| Protein sequence | MVLNLDTENR KTQNGNNCDD FDIEVKIPKS IFEKLKSIEA LKARESQMCI SGKDDSIPTC
DKNSTPGIIT QRSCVYGGAR VVLMPITDAV HLVHGPVGCA ACTWDIRGSK STGDKLYKNG
FTTDLQESDI VFGGEKKLYE SILEVHKLYS PGAIFVYSTC VVGLIGDDIK AVCKQAEEAT
GCRVIPVQSE GFKSFNKSAG HKLACDAMLD YLIGTEEPEE EHPYSINIIG EFNVAGDLWG
IIPLYEKMGV KVHTAITGDS TVKKVASAHR SKLNIVQCQK SSNYLAAQMQ KKYGIPNLKV
NFFGIDETTK SLRAVAEFFG DEEMIKKTEE LIKSEVKNLR DEISEYKKDL AGSTVAIYSG
AHKSWALVSA FGELDMEIIM SGTQNGKPED YQKIREHVNE GTLIVDDASS MELVQLLKEY
KPDILISGAK EKYLSLKSGV PHCDFNHDRI TAFSGFQGFI NFARVVHTAV MTPVWKLSRK
|
|---|
| |