| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1710 |
|---|
| Symbol | |
|---|
| ID | 5737450 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1608573 |
|---|
| End bp | 1610414 |
|---|
| Gene Length | 1842 bp |
|---|
| Protein Length | 613 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 641284211 |
|---|
| Product | aldehyde ferredoxin oxidoreductase |
|---|
| Protein accession | YP_001549754 |
|---|
| Protein GI | 159906092 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2414] Aldehyde:ferredoxin oxidoreductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.515612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACATTT TGATTGACGG AACAAAACAA AATTACGAAC TAATTTCTGG AAAAGAATTT
CCAATTTCAT TTGGGATTGA TTTACATAAC AAATACGAAA CTTGGAAAGT TGATGCATAC
AATGAAAAAA ATCTCTTCTG TTTTGGAAAA GGAATTTTAC CGGTTGTTGG AGGACATAGA
TTAATTTTTT CATTTAGATC TCCCCTATGG GAGGGATTTC ACTTTTCTGC AATGGGCGGT
GCAGGATACA CATTTAAAGA TACTGGTGTT CAAAACGTTG CGATCACAGG AAAATGCGAA
GTTCCAAGTA TTTTAGTAAT TAATGGGGAA GAAGACGAAT TAAAAGTAGA TTTCATTCCA
TTTACGGAAA AAATAACTGA TATTTATAAA TTTAATGACA AAATACTTGA AATATTTAAG
GGAAAAAATT ACAGGGCGTT TTTAGTTGGG CCTGCCTCAA AAACTACGAA TATGGGTGCA
ATTTACTCGC AAACCATAAA AAATGGAAAA ATCGTCGAAG GTTCTGAAGA CTGGGCTGCA
AGAGGTGGTG GGGGTTCAGT ACTCTGTCAG GCCCATAATA TATTAGGGGT TGTATTTTTT
GGTAAAAAAA CTCCTGAAAA GGACGTAAAA TCCGTTGTTG AAGAACACTA TCAAAAGCAG
TATTCAAAGG TAATTTTGGA ACATACTGAA AAATACAGAT ACAGTGAAGA AAGAAAAACA
GGCGGAACTT TTGGAAACAA CTACCACGTT ACCATGGATT TAACGCCGAT ATTTAACTGG
AGAATGCCAT TTATCGATAA AAATAGACGT TTGAAATTGC ATAAAAAAAT ACTTGAATAT
TTTGTGAGCA GATTTGATAA AGAAGCAATT GAAACTAAAA ATTGGACAAA TTGTGGAGAA
CCATGCCCAG TAGTTTGCAA AAAATATAGG AATGGACTTC ACGTAGATTA TGAGCCCTAT
GAAGCAAATG GTCCATGTAT CGGAGTTTTT GACCTATATT CGGCAGACAG CGTTGTTCAC
ACAATAGATA CGTTAGGATT TGATGCGATT GAATTTGGAA ACTTGTGTTC TTGGGTCTTT
GAACTATTGG ATAATGGAAT GTTAACCTCA AAAGACGTTG GAATTGAAAA GCCGGTCTTT
GATATCTCAA ACTTTGAAAA TGATGACGAT ATCTTAAAAA ATTCAAAGCA CAATGCAGAG
CAGGCCTTAA AACTTGCAGA AATCATTGCT TTTGAAACTA ACGAATTTGG AAAAATCTGT
AAATTTGGAG CTAGAAGGGC TGCGAAAACA CTGAATGAAA AATATAAAGA TAGAATTACT
GGCAAAAAAT TCGAAGATTT TGCAGTGTAC GATTCTTTCG GGGAAAATGG ACAGATTTCA
CCAACAATGT ACTGGGCAAT TGGAAATTTC ATGCCGTATC TAATTCAAGG AAAATATTTA
ACATACTATC AGTGCGGTGT TTTTTTAGAA CCTGAGGAGC TTGCAGAATT AAGCGTTAAA
AATTCAATTG AAGAAATTAC GCTTGAAAAT CTAGGAATAT GCAGATTCCA CAGAAAATGG
GTATCGCCAA TAATCGAAAA ACTTGTAAAA GAAGTAAGTA ACGTTGATAT CACAAAAGAA
TCTATGGAAC TATTCAAAAA AATTGCAATG TACGATTCAA ATATAGGTTA TCCGAAAATT
GAAAGCGAAA GAGTTAAAGA ATTGATAGTT TCTGGAGCCT ATGAATTTGA AAATGAAAAA
TGGGCAGAAG AATTTGAAAA AGGAAATTTC AATGAGTATA TAAAAAGAGT TCTTGAAAAA
TACAGCGAAT TATTAGATAT CGAATGGAAA TTAAAAGAAT AA
|
|---|
| Protein sequence | MNILIDGTKQ NYELISGKEF PISFGIDLHN KYETWKVDAY NEKNLFCFGK GILPVVGGHR
LIFSFRSPLW EGFHFSAMGG AGYTFKDTGV QNVAITGKCE VPSILVINGE EDELKVDFIP
FTEKITDIYK FNDKILEIFK GKNYRAFLVG PASKTTNMGA IYSQTIKNGK IVEGSEDWAA
RGGGGSVLCQ AHNILGVVFF GKKTPEKDVK SVVEEHYQKQ YSKVILEHTE KYRYSEERKT
GGTFGNNYHV TMDLTPIFNW RMPFIDKNRR LKLHKKILEY FVSRFDKEAI ETKNWTNCGE
PCPVVCKKYR NGLHVDYEPY EANGPCIGVF DLYSADSVVH TIDTLGFDAI EFGNLCSWVF
ELLDNGMLTS KDVGIEKPVF DISNFENDDD ILKNSKHNAE QALKLAEIIA FETNEFGKIC
KFGARRAAKT LNEKYKDRIT GKKFEDFAVY DSFGENGQIS PTMYWAIGNF MPYLIQGKYL
TYYQCGVFLE PEELAELSVK NSIEEITLEN LGICRFHRKW VSPIIEKLVK EVSNVDITKE
SMELFKKIAM YDSNIGYPKI ESERVKELIV SGAYEFENEK WAEEFEKGNF NEYIKRVLEK
YSELLDIEWK LKE
|
|---|
| |