| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1310 |
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| Symbol | |
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| ID | 5737565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 1216621 |
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| End bp | 1219290 |
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| Gene Length | 2670 bp |
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| Protein Length | 889 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641283805 |
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| Product | DNA-directed RNA polymerase subunit A' |
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| Protein accession | YP_001549355 |
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| Protein GI | 159905693 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02390] DNA-directed RNA polymerase subunit A' |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAGAT TTGATGTTCC AAAGGAAATC GGAGATATTA CATTTGGATT GCTCTCCCCC
GAACAGATAA GAACCATGTC AGTTGCAAAA ATCGTTACCG CAGACACATA CGATGACGAC
GGATACCCAA TTGACGGTGG ATTGATGGAT ACTAGACTCG GTGTTATTGA CCCCGGATTA
GTATGTAAAA GCTGCAGCGG AAGAGTAGGA ACTTGTCCTG GACACTTCGG ACATATTGAA
CTTTCAAAAC CAGTAATTCA CATAGGATTT GCGAAAGACA TTTACAAAAT CTTAAAAGCA
GTGTGCCCAC ACTGTGGAAA AGTTACAATT ACAGAGATCA AAAGGGACGA ATACTTAGAA
AAAATGGCCA AACTCGAAGA GGATGGTGGA GACCCTTGGA CACTCTGTGA TGATTTATTA
AAAGAAGCTG CAAAAGGTAG TGTCTGTCCT GCATGTGGTG AAGTAAAAGC AGATGTAAAA
TACGATAAAC CTACTGCATA CCACCAGTTA GATGGAAAAG CTCAAAAACA GTTGACATCC
TCAGAAGTCA GAGAAATTTT AGAAAAAATC CCTGGCGAAG ACTGTAAACT TCTTGGAATT
AATTCAAAAG TTGCTAGACC CGAATACATG GTTTTAACAG TTTTACCAGT TCCTCCAGTA
ACAGTTAGGC CTTCAATCAC ACTCGAAAGT GGAGAAAGAA GTGAAGATGA CTTAACGCAC
AAATTAGTTG ATATTATCAG AATTAACCAG AGGTTAGAAG AAAATATCAA CGGTGGAGCT
CCAAACTTGA TTATTGAAGA TTTATGGGAC TTATTACAGT ATCACATAAA CACGTACTTT
GATAACGAAG CACCTGGAAT TCCTCCAGCA AGACACAGAA GTGGAAGGCC GCTTAGAACA
CTTGCTCAAA GGTTAAAAGG TAAAGAAGGA AGGTTCAGAC ACAACTTAGC TGGTAAAAGG
GTAAACTTCT CTGCAAGGAC CGTTATTTCA CCTGACCCGA GACTCAGTAT TAACGAAGTT
GGTATTCCAA AACTAATCGC GAAAGAATTA ACTGTTCCTG AAAAAGTTAC CCCCTACAAC
ATCGAAAGAG TAAGGGCACT TTTAAGAAAC GGAGCTGACA CTCACCCCGG TGTAAACTAC
GTTATTAAGA AAGTTAAAAC TAAAGACGGA AAAGAAGAAG AATACAAGAT AAAAATCACA
GATGCCAACA AAGAAATGTG GGTAGAAAAT ATAACCGATG GAATGGTTAT TGAAAGACAC
CTTTCAGACG GAGACGTCGT GTTGTACAAC AGACAGCCAT CTCTACACAG AATGTCAATT
ATGGCACACA AAGTAAAAGT TCTCCCATAC AGAACGTTCA GACACAACTT GTGTGTATGT
CCACCTTACA ACGCGGATTT CGATGGTGAC GAGATGAACG TTCACGTTCC ACAATCCGAA
GAAGCAAGAG CTGAAGCTGA AACATTAATG CTCGTTGAAA AACATATTGT TTCCCCGAGA
TTTGGTGGTC CAATTATCGG TGCAATTCAC GACTTTATTT CAGGAGCATA CGTTCTTACA
AGTTCATTAT TTACAAAAGA CGAAGCTTTG ACATTATTGA AAAGCTCCGG ACTAAGTACT
GAACTTGGAG AAGCGGACGT TGTTGAAAAT AAAGTGGAAT ACTACAGCGG AAAATCATTA
TTCAGTAAAA CTCTTCCAGA AGGATTGAGC TTACAGTATA GGGCAAAAAT CTGTAAAAAA
TGTGACAATT GTACCAAAGA AGAATGTGAG CATGACGCTT ACGTTGTAAT TAGAAACGGT
AAACTCTTAC AGGGAGTAAT TGATAAAAAC GGATTTGGTT CAGAAGCAGG AATCATATTA
AACACGCTTG TAAAAGACTT CGGTTCAGAA GATGCAAGAG TATTCCTCGA TTCTGCAACC
AAAATGTCAA TAAAAGCATT AGTTTTAAAA GGATTTACAA CCGGTATTGA CGATGAAGAT
ATCCCTGCTG AAGCAATTCA GGAAATTCAG GATTTGTTAA ACAAAGCTGA ACAGGATGTT
GAAGATATCG TTGAAAAATA TGAAAACGGA ACTTTAGAAT CCTTGCCCGG AAGGGGTGTT
GAGGAATCCA GAGAAGCATA CATCATGCAG ATTTTGGGTA AAGCAAGGGA CCAAGCTGGT
AACGTTGCTG AAAAATACTT AAGTAAAGAA AACCACGCGG CTCTGATGGC AAGAACTGGT
GCAAGAGGTT CACTCCTTAA CATTACGATG ATGGCTGCAA GTGTTGGTCA GCAGTCAGTT
AGGGGTGGTA GGGTCTTTAG AGGTTACAGA GAAAGAACCC TTCCGCACTT TGGAAAAGGA
AGTTTAGATG CAAAATCACA CGGATTCGTT AGAAGCTGTT ACAAAAAAGG ATTGGCACCA
ACAGAATACT TCTTCCACGC GATGGGTGGT AGAGAAGGTC TTGTAGATCA GGCGGTTAGG
ACTGCACAAT CTGGTTACAT GCAGAGAAGA CTCGTAAACG CTTTACAGGA TATTAGGGCA
GAATACGATG GAACCGTAAG AGATTCAAGA GGACTCGTTG TTCAATTCGA ATACGGGGAA
GATTTGGTAG ACCCTGCAAA AGCAGACCAC GGAAAAGGTG TAGATTTAGA TAAAATATTC
ACAAAAGTTA ATTCAAAATA TGAAAATTAA
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| Protein sequence | MDRFDVPKEI GDITFGLLSP EQIRTMSVAK IVTADTYDDD GYPIDGGLMD TRLGVIDPGL
VCKSCSGRVG TCPGHFGHIE LSKPVIHIGF AKDIYKILKA VCPHCGKVTI TEIKRDEYLE
KMAKLEEDGG DPWTLCDDLL KEAAKGSVCP ACGEVKADVK YDKPTAYHQL DGKAQKQLTS
SEVREILEKI PGEDCKLLGI NSKVARPEYM VLTVLPVPPV TVRPSITLES GERSEDDLTH
KLVDIIRINQ RLEENINGGA PNLIIEDLWD LLQYHINTYF DNEAPGIPPA RHRSGRPLRT
LAQRLKGKEG RFRHNLAGKR VNFSARTVIS PDPRLSINEV GIPKLIAKEL TVPEKVTPYN
IERVRALLRN GADTHPGVNY VIKKVKTKDG KEEEYKIKIT DANKEMWVEN ITDGMVIERH
LSDGDVVLYN RQPSLHRMSI MAHKVKVLPY RTFRHNLCVC PPYNADFDGD EMNVHVPQSE
EARAEAETLM LVEKHIVSPR FGGPIIGAIH DFISGAYVLT SSLFTKDEAL TLLKSSGLST
ELGEADVVEN KVEYYSGKSL FSKTLPEGLS LQYRAKICKK CDNCTKEECE HDAYVVIRNG
KLLQGVIDKN GFGSEAGIIL NTLVKDFGSE DARVFLDSAT KMSIKALVLK GFTTGIDDED
IPAEAIQEIQ DLLNKAEQDV EDIVEKYENG TLESLPGRGV EESREAYIMQ ILGKARDQAG
NVAEKYLSKE NHAALMARTG ARGSLLNITM MAASVGQQSV RGGRVFRGYR ERTLPHFGKG
SLDAKSHGFV RSCYKKGLAP TEYFFHAMGG REGLVDQAVR TAQSGYMQRR LVNALQDIRA
EYDGTVRDSR GLVVQFEYGE DLVDPAKADH GKGVDLDKIF TKVNSKYEN
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