| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1296 |
|---|
| Symbol | |
|---|
| ID | 5737597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 1203372 |
|---|
| End bp | 1204439 |
|---|
| Gene Length | 1068 bp |
|---|
| Protein Length | 355 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 641283791 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001549341 |
|---|
| Protein GI | 159905679 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1800] Predicted transglutaminase-like proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.174239 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTAA AACTGAAAAA CATAATTTAT ATTGCAATTG TTGGAATTTT AGCAGTTTCC
ACACTATTTT TTATTCAAAA TAATTCTGAA ATATCGAATT TATCGGACAT TTTTGAAAAT
ATTGGATTTG GTGAAACCTC TGAAAAACTC CCAAAATATA TCTTCGAAGA TTCGATTGAG
GTATATTTAT CCCCACATGA ACTTGAAAAA GTATCTAATT TAGCCCAATC ACTAAATGGA
AATACGATTG AAGATTCCAT CTGGAATATT ATACTCTGGG AAGAAGATAA CATTGAATAC
AGCCACGTGA AAGCTGAACT GCCAACTCCA GAAGTTACAT ACTGGATAAC TGGAAAAAAA
GAAGTTTCTG ACCCATACAA CAATACAATA CAGAGTCCTG CTGAAACTCT CAAATTAAAA
TCTGGAATTT GTGGAGATTA TGCATTATTA ACTTCTGCAT TACTTTTAAA AATGGATTAC
TCCCCAATAT ACATTTTAAC ATTTGAATCC AATGGAAACC CAGGTCATGC TGCCGCTGCA
GTTAATCTAA ATGGTAATTA CTACATCATC GACCAGCAAC CTCCAATAAT GGATTTATAT
AATTATTTAG ACTACAAGAG CGACGTTGAA GATTATTCAA TAGATAATAT CACATTTTAC
AAAATTGAAT TGATAAACGA TTCAGTTTAC TATGAAAATG GTTTTGAAGC CGTAGGATAT
TACAACGCAG CTTCTAACGA ATACAGCGAT ATTCCCGGAC TTTCAAGGTA TTTGATGACG
TATTTTGAAC AGAATTATGA ACTAAAAAGT GATTACAATA TTAAATATCT GGATTCAAGG
GAATACCTTC CAAGAGCATA CGAAAAAGGA GTAACAATTC AATATTTCTT TGAATTTGGT
GGATACACCC CAATTTTTGA AAAACAGTAT GCAAAATGGG CATTTGATTA CATCAAAGAT
GATATGGATA AAAGTAACTA TGATATTTCA GAATACAATT CCATCTGGAT TAGAAGTTCA
TATGATGGAA AAAAACTTAA CTTGGTAATA AATCTGGCTA AAAAATAA
|
|---|
| Protein sequence | MNLKLKNIIY IAIVGILAVS TLFFIQNNSE ISNLSDIFEN IGFGETSEKL PKYIFEDSIE
VYLSPHELEK VSNLAQSLNG NTIEDSIWNI ILWEEDNIEY SHVKAELPTP EVTYWITGKK
EVSDPYNNTI QSPAETLKLK SGICGDYALL TSALLLKMDY SPIYILTFES NGNPGHAAAA
VNLNGNYYII DQQPPIMDLY NYLDYKSDVE DYSIDNITFY KIELINDSVY YENGFEAVGY
YNAASNEYSD IPGLSRYLMT YFEQNYELKS DYNIKYLDSR EYLPRAYEKG VTIQYFFEFG
GYTPIFEKQY AKWAFDYIKD DMDKSNYDIS EYNSIWIRSS YDGKKLNLVI NLAKK
|
|---|
| |