Gene MmarC6_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1256 
Symbolrpl19e 
ID5739030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand
Start bp1171306 
End bp1171755 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content38% 
IMG OID641283751 
Product50S ribosomal protein L19e 
Protein accessionYP_001549301 
Protein GI159905639 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2147] Ribosomal protein L19E 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.021288 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATGTAT CAACCCAAAG AAGAATTGCT GCAGCTGTTT TGGATTGCGG TATCGATAGG 
GTATGGATTG ATCCTGAAAA CCTGGAAAAA GTCAAAATGG CAATCACCAA AGATGACATT
AGACTCTTGA TTAACGATGG AATCATTGTT AAGAAACAGG AAAAGGGAAT CAGTAGCGCT
AGGAAAAAAG AAGTTCAGGA ACAGAAGAGA AAAGGAAAGA GAAAAGGTCC TGGTTCAAGA
AAAGGGGCTA AAGGTGCAAG AACTCCTAAA AAAGAAAAAT GGATGAACAC CATCAGGCCA
CTTAGAAAAA TGCTGAAAGA CTTAAGAGAA AATGAAAAAA TCGAAAGATC AGCATACAGA
AAACTCTACA GAATGGCTAA AGGTGGCGCA TTCAGAAGTA GAAATCACAT GAAGTTATAC
ATGAAAGAAC ACGGAATTTT AGCTGAATAA
 
Protein sequence
MDVSTQRRIA AAVLDCGIDR VWIDPENLEK VKMAITKDDI RLLINDGIIV KKQEKGISSA 
RKKEVQEQKR KGKRKGPGSR KGAKGARTPK KEKWMNTIRP LRKMLKDLRE NEKIERSAYR
KLYRMAKGGA FRSRNHMKLY MKEHGILAE