| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1250 |
|---|
| Symbol | |
|---|
| ID | 5739071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 1166572 |
|---|
| End bp | 1167471 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641283745 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001549295 |
|---|
| Protein GI | 159905633 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0472] UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.197233 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT ATTTTGTTTT ATCTGCTTTA TTTTCTTTTG TAATTTCCAT TATATTTACA
AAATTCATAA TTGGAAAACT GACAAACAAC AAGTATGGTT ATGATTTGCA TAAGGAAAAT
AAAATTAAAG TAGCTGAAAT GGGGGGGATT TCTCCAGTAA TTGTAAGTTC ACTAGCAATG
CTTTTTTTTA ATCCTGCACT TTCAATGAGT ATATTTTTAT CAGGATTTGT TGGGGTAATT
GATGATATTT CAAGATTGAA TTCGAAAGAA AAAGTAATTT TAACGTTTTT AATTGGGTTT
CCAGTTGCGC TTTTTTTAAA ATTAAATGTG GTATTATCTG TTCTATTAAT CCTTGGAATT
TTTGTATCTT CAAATTTAAC AAACATGCTT GCAGGGTTTA ACGGTCTTGA AATTGGGATG
GGAATACTTC TTTGTTTATT TATGGCAGCA GTATGTTTAT TAAACGGAGA TATTTTTGGA
TTTAAAGTTT TAATCTTATT TTCAGCAGCA TACCTTGGAC TTTTATACTA CAACAAATAT
CCTGCAAAAG TGTTTCCTGG AGACACTGGA ACTCTTCCAA TTGGCGCATT TTTGGCAACT
GTTGCAGTAT GGAGGGGTTT TATTCCTGAA TTTTTTATAC TCATGATTCC ATACATGGTT
GATGCACTTT TAAAGCAGTT TACCGCAGGA GTTACAAAAA AAGACAGTGT ATTTACACCT
ACCGAATTAA AAAATGGAAA ATTACATGTT GGTGGAGGAT ATTTGTCGTT ACCAAGAATG
ATCTTAATGA AAAAATCAAT GGAAGAATAC AAAATAGTAC TTGTACTATG GATTATCGAA
ACCTTTTTTG GAATTTTGAG TATTTTATAT ACAAAATACA TCGGATTTAA TATTTTTTAA
|
|---|
| Protein sequence | MDLYFVLSAL FSFVISIIFT KFIIGKLTNN KYGYDLHKEN KIKVAEMGGI SPVIVSSLAM
LFFNPALSMS IFLSGFVGVI DDISRLNSKE KVILTFLIGF PVALFLKLNV VLSVLLILGI
FVSSNLTNML AGFNGLEIGM GILLCLFMAA VCLLNGDIFG FKVLILFSAA YLGLLYYNKY
PAKVFPGDTG TLPIGAFLAT VAVWRGFIPE FFILMIPYMV DALLKQFTAG VTKKDSVFTP
TELKNGKLHV GGGYLSLPRM ILMKKSMEEY KIVLVLWIIE TFFGILSILY TKYIGFNIF
|
|---|
| |