Gene MmarC6_1207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC6_1207 
Symbol 
ID5738053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C6 
KingdomArchaea 
Replicon accessionNC_009975 
Strand- 
Start bp1133581 
End bp1134222 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content36% 
IMG OID641283702 
Productsignal transduction protein 
Protein accessionYP_001549252 
Protein GI159905590 
COG category[K] Transcription 
COG ID[COG2524] Predicted transcriptional regulator, contains C-terminal CBS domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value0.230194 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTAA AAAGCTTGAT GGATAAAAAA TTTATTAAAA TATATCCTGA TTTTACTGTG 
CAGACGGTTA TTGACTTAAT GTATAAAAAT AAAAAATTCA GCACGCCCAT TATTGACAAC 
GACGACAAAA TGGTTGGCTG GACAACTGCT ATTGATTTGA TGGTCGTTTC GGATAAAAAT 
ATTCCAATAA AAGACATCAT GAGTCCACTT GAAGACGTAA TCGTCGTAAA CAAAAACGAA 
CCTGCAAGGG AAGCGGTTAC CAAAATCGTT GAATACAAGG TTATAAGCAT TCCAGTTTTA 
AATGATCGTG GACAGGTTGT TGGAATCGTT AGAAACTGCG ACATTACCAA AACTCTTTCT 
AAACTCTACG ACATTCCAGT ACATGGCATT TTTAAATCAT TAATGGGGGA ATTAAAAGGA 
ATTTCCTGGG AAGAATTAAT GAATGCAGCT GCAATCGTTA CAAAACAGAC CACTGGCGAA 
ACCATCACAG GTGAAGATTA CGAAAGAAGA ATAAAAGATT CCACATTTGG TCAGGCAATC 
TGGGCATGCG GAGGACTTGA AAAATTCTTC ACAGGCCTCA TAAAAATCGG TGAAGTTGCG 
CTCGCAAGAA AAGTAAGCTG CAAAAATGTC ATAAAAAAAT AA
 
Protein sequence
MKVKSLMDKK FIKIYPDFTV QTVIDLMYKN KKFSTPIIDN DDKMVGWTTA IDLMVVSDKN 
IPIKDIMSPL EDVIVVNKNE PAREAVTKIV EYKVISIPVL NDRGQVVGIV RNCDITKTLS 
KLYDIPVHGI FKSLMGELKG ISWEELMNAA AIVTKQTTGE TITGEDYERR IKDSTFGQAI 
WACGGLEKFF TGLIKIGEVA LARKVSCKNV IKK