| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_1024 |
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| Symbol | |
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| ID | 5738620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 971739 |
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| End bp | 972962 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 641283516 |
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| Product | proteasome-activating nucleotidase |
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| Protein accession | YP_001549071 |
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| Protein GI | 159905409 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | [TIGR01242] 26S proteasome subunit P45 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.123618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTACC CAGATGATTA TTCCACAGAC GTAGAAAAAA ATAAAATGGA TTTAAAAGAA
TTTAAAGAAA AAACTCAGAT TGCAGAGTTA GAAAGCAAAG TTTTGAGATT GGAATTAAAA
AATAAAGATA TTAGTAGAGA GAACGTACAG ATTAAAAAAG AAAATGAAAT ATTAAAGCGA
GAACTTGATA AATTAAGAAT TCCTCCCTTA ATACTTGGTA CAATACTTGA CAGAGTAAAC
GAAAGAAAAG CAGTTGTTAA AAGTTCTACC GGGCCAAACT TCCTTGTAAA CCTTTCACAA
TTTGTAGACC CTGAAGACAT TGTTCCAGGA GCAAGAGTTT GTTTGAACCA GCAGACTTTA
GCAATTGTAG AAGTACTTCC TAAAGAAAAA GACTACCGAG CTATGGCAAT GGAAATTGAG
GAAAAACCAG ACATTTCCTT TGAAGATATC GGTGGTTTAA ACAACCAGAT AAGGGACATT
AAAGAAGTAG TAGAACTCCC ACTCAAAAAC CCTGAATTAT TCGAAAAAGT GGGTATTGTT
CCACCAAAAG GAGTATTGCT CTATGGTCCA CCTGGAACTG GAAAAACACT CCTTGCAAAA
GCTGTTGCAT ATGAAACCAA CGCATCATTT GTTAGGGTTG TTGGTTCAGA ACTCGTCAAA
AAATTCATCG GTGAAGGTGC AAAACTTGTA AGAGATGTTT TCAAACTTGC AAAAGAAAAG
TCACCTTGCA TTATATTTAT TGATGAAATC GATGCGGTTG CAAGTAAAAG AACTGAATCA
TTAACCGGTG GAGATAGAGA AGTTCAGAGA ACTTTAATGC AACTTCTTGC AGAAATGGAT
GGTTTTGATT CAAGAGGAGA TGTAAAAATC ATCGCTGCAA CGAACAGACC AGACATTTTA
GATCCTGCAA TACTCAGACC TGGAAGATTC GATAGAATTA TTGAAATTTC AATGCCTGAT
GAAGATGGAA GACTTGACAT CTTGAAAATC CACACTGAAA AAATGAATCT TAAAGGCGTG
GATTTAAGAG AAGTTGCAAA ACTTGCAGAA AACATGGTGG GTGCTGACTT AAAAGCAGTA
TGTACTGAAG CAGGTATGTT TGCAATAAGA GAAGAAAGAG AATTCATCAA AATGGATGAC
TTCAAAGAAG CAATCTCCAA AATTACCGGT AAAAAAGAAA AATGCAGTTA CGATATGCCA
CAATTAACCG TAATGTACGG ATAA
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| Protein sequence | MSYPDDYSTD VEKNKMDLKE FKEKTQIAEL ESKVLRLELK NKDISRENVQ IKKENEILKR
ELDKLRIPPL ILGTILDRVN ERKAVVKSST GPNFLVNLSQ FVDPEDIVPG ARVCLNQQTL
AIVEVLPKEK DYRAMAMEIE EKPDISFEDI GGLNNQIRDI KEVVELPLKN PELFEKVGIV
PPKGVLLYGP PGTGKTLLAK AVAYETNASF VRVVGSELVK KFIGEGAKLV RDVFKLAKEK
SPCIIFIDEI DAVASKRTES LTGGDREVQR TLMQLLAEMD GFDSRGDVKI IAATNRPDIL
DPAILRPGRF DRIIEISMPD EDGRLDILKI HTEKMNLKGV DLREVAKLAE NMVGADLKAV
CTEAGMFAIR EEREFIKMDD FKEAISKITG KKEKCSYDMP QLTVMYG
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