Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0945 |
Symbol | |
ID | 5738683 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 887765 |
End bp | 888661 |
Gene Length | 897 bp |
Protein Length | 298 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641283425 |
Product | protein of unknown function RIO1 |
Protein accession | YP_001548992 |
Protein GI | 159905330 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0478] RIO-like serine/threonine protein kinase fused to N-terminal HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGATA ACGACTGGAA ACTTTTAAAA ATAATTGAAA TTTCAATGAA AAATCACGAA TGGGTACCTA TTCAGGACTT AAGACGAAAA ACGGGATTTC ATGAAAAAGA AGTAGTTTTC AGGCTCGGAA GATTGAATAA ATTTAAGTTT ACTAACAAGT CTAATTACGG ATACAGGCTT TCTCACTGGG GATACGACGC TTTAGCGATG AAGGCGTTTA TAAAAAAGGA ATTAATTGCA GGAATTGGTG GGAAGGTAGG CGTTGGGAAA GAAGGCGACG TTTACCACGT GATGCTCACG AATCACCGTG AAGCAGTTAT GAAATTCCAC CAGCTTGGGA GAACCTGTTT TTCAATGGGA AAAAGATACA GGGAATACCT TGCAAATAAA AGGCACATCA GCTGGCTTTA TGCTTCAAGG CTCACTGCTG CAAGAGAATT TGAAGTTTTA ACAATGCTTT TTCCAGTCGT AAAAGTTCCT GAACCAATCG AACAGAACAG GCATGCAATA ATAATGGGAA AACTTCATGG AGAAGAATTA AAGCGTGTTA ATCTTCTTGA AATAGGTGTA AATCCTGAAG AATTTTTTTG GAAATTAATG ACAGAAGTTA AAAAAACATA TGCGCTTGGA ATTATTCACG GGGATTTAAG TGAATTTAAT ATATTGATCG ATTCAGAAGG CGATTTTGTA ATTATTGACT GGCCTCAAGC AATTGAAGTT GGAAAAAAAG GAAAATTGGA CAAGTTACCG TTTGAAGAAG TGGAATACGA TGAAGAATAT TATCTAAAAA GGGATATTGA AAATTTGTTA AGGTACTTTA AAAAGTACGG AATCGACAAG GACGTGGATA AGCTATATAA TTATGTTCTT GGAGATATTA GTAGCGAAAA TGTTTAA
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Protein sequence | MEDNDWKLLK IIEISMKNHE WVPIQDLRRK TGFHEKEVVF RLGRLNKFKF TNKSNYGYRL SHWGYDALAM KAFIKKELIA GIGGKVGVGK EGDVYHVMLT NHREAVMKFH QLGRTCFSMG KRYREYLANK RHISWLYASR LTAAREFEVL TMLFPVVKVP EPIEQNRHAI IMGKLHGEEL KRVNLLEIGV NPEEFFWKLM TEVKKTYALG IIHGDLSEFN ILIDSEGDFV IIDWPQAIEV GKKGKLDKLP FEEVEYDEEY YLKRDIENLL RYFKKYGIDK DVDKLYNYVL GDISSENV
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