Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0923 |
Symbol | |
ID | 5738641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 864676 |
End bp | 868071 |
Gene Length | 3396 bp |
Protein Length | 1131 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641283403 |
Product | DNA polymerase II large subunit |
Protein accession | YP_001548970 |
Protein GI | 159905308 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1933] Archaeal DNA polymerase II, large subunit |
TIGRFAM ID | [TIGR00354] DNA polymerase, archaeal type II, large subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTCATG TTTCAGCTTC AAAAGGAATG GCAGAATATT TCAAAAATAT TTTAGATAAT GTAACCGAAC TCTACACACT TGCAGATGAT TGCAGGAAAA GCGGATATGA TGTAACAGAC CACGTTGAAA TACCTCTGGC AAAAGATATG GCAGATAGGG TAGAAGGAAT TGTCGGTCCA AAAAATGTTG CAGAACGTAT TCGGGAACTT GTATCTGACT TAGGAAAAGA ACCTGCAGCA CTTGAAATTG CAAAAGAGAT AGTTGAAGGA AAGTTTGGTG AGTTCGGGCG AGAAGTTGGA GCAGAACAAG CCGTAAGAAC AGCATTAGCA GTTATCACGG AAGGAATCGT GGCAGCACCT CTAGAAGGAA TTGCACATGT TAAAATTAAG AAAAACAACG ATGGCAGTGA ATACCTTGCA ATCTATTTTG CAGGACCAAT TCGGAGTGCA GGGGGAACTG CTCAGGCACT TGCAGTACTT GTTGGGGATT ACGTTAGAAA AAACATGGGA TTGGATAAAT TTAAACCTAC AGAAGATGAA GTTGAAAGAT ACGGCGAAGA AGTGGATTTG TACCAGTCTG AAGTTACTAC CTTCCAATAC CAGCCAAAAG CTGAAGAAAT CAGGGTGGCG GTTAGAAACA TATCTGTAGA AATTACTGGA GAAGCAACAG ACGACGTTGA AGTTAGCGGA CACCGGGATT TACCAAGAGT AGAAACAAAC CAGATTAGGG GCGGGGCTCT CTTAGCGCTT GTTGAAGGTG TTCTTTTAAA GGCACCTAAA ATTTTAAGAC ACGTTGATAA ATTGGGTATC GAAGGATGGG ATTGGCTAAA AGAGTTAAAA AGCAAAAAAG AAGAAGTAAT CGAAGAAATT GAAGAAGAAA AAGACGATTT TAACTACGAA GAGGAAGAAG ACTTATCACA ATACGAAGAC TACGAGGTAG AGGCAGTAAC CAAATTTATT GGTGAAGTTA TTGCAGGAAG GCCTGTATTT TCACACCCTT CCAAAAAAGG GGGATTCAGA CTCAGGTATG GAAGAAGCAG AAACACTGGG TTTGCAACAG ATGGTTTTCA CCCAGCAATA ATGTATCTAG TTGATGACTT CATGGCAGTA GGAACACAGT TAAAAACTGA AAGACCTGGA AAAGCAACCT GTGTAGTTCC TGTTGACAGT ATCGAAGGTC CAATCGTTAA ATTAAATGAT AAAAGTGTAC TTAAAATTGA TACTGTTGAA AAAGCAAAAC AATATCGGGA TGATGTTGAA GAAATTCTTT TTTTAGGAGA TATTTTAGTA AATTATGGGG ATTTCTTGGA AAATAACCAC ACCATACTTC CAAGCAGCTG GTGTGTTGAA TGGTATGAAA AAATCTTAAA ATCTGAAAAT TTAGAATATA CGAAAGAATT TATAGAAAAT CCAGACCAAA AAGAAGCAGT AACTTATGCG AAACTTACAA AAACACCCTT ACATCCGAAA TACACGTATT TCTGGCACGA TATTTCTAAA GATAATATCA ATGTTCTTAG AAACTGGCTC ATTGGTGGAA AATATAATGA AAACAACGAT TCGTGGGAAT TAACTTATAA TTTAGAAGAT TCAGAAATTG CAACTTCGAA GAGGTATTTG GAACTTATCG GATGTCCGCA CACAGTAACT GCTGAAACAG TAGAAATTTT TGAGTATTAT CCATTATTAT ATTCATTAGG TTATGATTTT GATAAAAAAC AGGATATTGT GGAAGATATT GGAGAAAAAC TTCAGAATAC GAAAAATAAC ATGCACTTTA TAAATACGAT AGCACCATTT GAAATTCGAA GAAACGCCTA CATCTATGTT GGTGCAAGGA TGGGTAGACC AGAAAAGGCA GCTTCCAGAA AGATGAAACC CCCTGTAAAT GGGCTTTTCC CAATTGGAAA TGCCGGGGCG CTTGTAAGGC TCATAAACAA AGCTGTTGAA GAAGGAAAAA CTGACGAAAT CGAAATTTCA AATGTAAAAT GTAGCTGTGG AAATGTAAGT TTGTATAGGA CATGTCCATT CTGCGGAAGT TCTGTCGAAC CAAGCGGGCC TTCTCGAATA AAACTTCCAA TAAAAGAATA CTGGTACAAA GCGCTTGAGA ACTTGAAGAT AAATAAAGCT GGCGATGTAA AATGTATCAA AGGTATGACT TCAAAGGATA AAATAATTGA ACCCTTAGAA AAAGCGATAT TGAGGGCAAA AAACGATATA TTTGTATTTA AAGACGGCAC TACTAGGTTT GACTGTACTG ATGTTCCAGT AACGCATTTC AGGCCTGTAG AAATACATGT CGGTATTGAA AAATTGAAAT TTCTTGGATA TTTAAAAGAT ATTCATGGAA ATCCGCTTGA AAATGAAAAT CAGGTACTCG AATTAAAAGT TCAGGATGTT ATAGTCCCTG AATCTTGCAT GGATTATTTC TTCAATGTTT CAAAATTTAT AGATGACCTC TTGGAAAAAT ACTACAAAAA AGATAGATTT TACAACGTGA ATAAAAGAGA AGAGCTTGTA GGTCACTTAA TAATTGGAAT GGCACCACAC ACGTCTGCAG GAATGGTCGG AAGGATTATT GGATATAGCT ATGCAAATGT AGGCTATGCA CACCCGTATT TCCACGCTTC AAAAAGAAGA AACTGCGATG GGGATGAAGA TGCATTTTTC CTACTTTTAG ATGCATTCAT GAATTTTTCA AAGAGATTTT TACCGGACAA AAGAGGGGGC CAGATGGATG CACCTCTGGT TCTTACAACA ATTCTGGATC CTAAGGAAGT GGATGGTGAG GTTCACAACA TGGATTCGAT GTGGGAATAT CCTCTCGAAT TCTATGAAAA ATCCCTTGAA GGAATTGCTC CAAAAGAAAT CAAAAAAATA ATGCAAACCG TTGAAGACAG GCTTGATAAA GACAGTCAGT ACGAAGGAAT TGGATACACT CACGAAACTT TGAAGATTGA TGAAGGACCC CTAGTTTGTG CTTACAAAAC ATTGGGTTCC ATGATGGAAA AGACCTCAGC TCAACTTGCG GTTGCAAAAA AGATTAGGGC AACTGATGAA AGGGATGTAG CAGAAAAGGT TATACAATCA CACTTTGTAC CTGATTTAAT TGGAAATTTA AGGGCTTTTT CAAGACAGGG TGTAAGGTGC AAATGCGGTG CAAAATACAG AAGAATGCCT TTAAAAGGGG TTTGTAGAAA ATGCGGAAGC AGATTGATTT TGACAGTTTC AAAAGGGGCT GTTGAAAAGT ACATGGACGT TTCACAAACA ATGGCTGAAA AGTACAATGC AAGCGACTAC ATAAAACAAA GACTCGAAAT TATACGGTCC GGAATTGACA GTTTGTTTGT AAATGACAAG AGAAAGCAGG TTAAAATTGA AGATTTCTTT AAATGA
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Protein sequence | MLHVSASKGM AEYFKNILDN VTELYTLADD CRKSGYDVTD HVEIPLAKDM ADRVEGIVGP KNVAERIREL VSDLGKEPAA LEIAKEIVEG KFGEFGREVG AEQAVRTALA VITEGIVAAP LEGIAHVKIK KNNDGSEYLA IYFAGPIRSA GGTAQALAVL VGDYVRKNMG LDKFKPTEDE VERYGEEVDL YQSEVTTFQY QPKAEEIRVA VRNISVEITG EATDDVEVSG HRDLPRVETN QIRGGALLAL VEGVLLKAPK ILRHVDKLGI EGWDWLKELK SKKEEVIEEI EEEKDDFNYE EEEDLSQYED YEVEAVTKFI GEVIAGRPVF SHPSKKGGFR LRYGRSRNTG FATDGFHPAI MYLVDDFMAV GTQLKTERPG KATCVVPVDS IEGPIVKLND KSVLKIDTVE KAKQYRDDVE EILFLGDILV NYGDFLENNH TILPSSWCVE WYEKILKSEN LEYTKEFIEN PDQKEAVTYA KLTKTPLHPK YTYFWHDISK DNINVLRNWL IGGKYNENND SWELTYNLED SEIATSKRYL ELIGCPHTVT AETVEIFEYY PLLYSLGYDF DKKQDIVEDI GEKLQNTKNN MHFINTIAPF EIRRNAYIYV GARMGRPEKA ASRKMKPPVN GLFPIGNAGA LVRLINKAVE EGKTDEIEIS NVKCSCGNVS LYRTCPFCGS SVEPSGPSRI KLPIKEYWYK ALENLKINKA GDVKCIKGMT SKDKIIEPLE KAILRAKNDI FVFKDGTTRF DCTDVPVTHF RPVEIHVGIE KLKFLGYLKD IHGNPLENEN QVLELKVQDV IVPESCMDYF FNVSKFIDDL LEKYYKKDRF YNVNKREELV GHLIIGMAPH TSAGMVGRII GYSYANVGYA HPYFHASKRR NCDGDEDAFF LLLDAFMNFS KRFLPDKRGG QMDAPLVLTT ILDPKEVDGE VHNMDSMWEY PLEFYEKSLE GIAPKEIKKI MQTVEDRLDK DSQYEGIGYT HETLKIDEGP LVCAYKTLGS MMEKTSAQLA VAKKIRATDE RDVAEKVIQS HFVPDLIGNL RAFSRQGVRC KCGAKYRRMP LKGVCRKCGS RLILTVSKGA VEKYMDVSQT MAEKYNASDY IKQRLEIIRS GIDSLFVNDK RKQVKIEDFF K
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