Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0676 |
Symbol | |
ID | 5738989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | + |
Start bp | 621643 |
End bp | 622785 |
Gene Length | 1143 bp |
Protein Length | 380 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 641283142 |
Product | TraB family protein |
Protein accession | YP_001548725 |
Protein GI | 159905063 |
COG category | [S] Function unknown |
COG ID | [COG1916] Uncharacterized homolog of PrgY (pheromone shutdown protein) |
TIGRFAM ID | [TIGR00261] pheromone shutdown-related protein TraB |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.203898 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATATAA GGGTTAACAA TGGCGTTACG GAATGTAACA TCAGATTGGT AGGAACTGCA CACGTATCTG ATGATAGTAT TACTGATGTA GAGAACGCTA TCGTTGAAAC GGATCCAGAA TTAGTGGCTA TTGAATTAGA TAAAGACCGA TTTGTAGCCA TGTTTCAAAA TAAAAAAAAT GACGTGGATT TAAAATCAGT CATAAAACAA GGAAAAGTAG GAATATTCAT AGTGCACTCC ATCTTAGCAA ACTTCCAGAA AAATATCGGG GAACAGTTTG GGATAAAACC TGGAAGCGAA ATGAAAAAAG CCACCGATCT TGCAATACAG TACGGAAAAC CACTTTCACT AATTGATAGG CCAATAAATA TTACTTTATC AAGAACCATC AACAAAATGA CGTTTAAAGA AAAATTTGAT TTTTTAGTCG GCCTTTTAAC TGAACAAAAC GTTGAATTGG ACGAAAAAGC AGTTAATGAC ATGGTCTCAA ACGCTGATGA TTTAATTTTA CTTTTAAAGG ATATTTCCCC TTCAATTTAC GAAACCCTTG TTGATGAAAG AGATAAATAT ATGGCAAAAA ACCTCTTCGA ATCAAGTAAA GGCAAAGAAA ACATCGTTGC AGTAGTTGGG GCTGGACACG TTCCGGGGAT TAAAAATTAC CTTAAAAAAA TGGAATCCGG AGAAGACATT GAATTAAAAT CATTAATGGA AGTAAAAAAA AAGTCAAACG TTTTAGGTAA AGTAATATCA ATTGCAATTC TTTTAATCAT ACTGTACGGA TTTTACAGTG CATCGTCAAA TCTAGAAGCA CTAAAGACCT TAACGTTAGA ATGGGTACTA ATAAACGGAT GTCTTTCATC ATTAGGTGTT CTTATAGCCA GAGGTAAATT TCAAACGATG ATTGCAGCAT TTTTAGCAGC TCCAATCACA TCATTGATTC CTGTAATCGG TGCAGGCTAC GTTGCAGGAT TAGTTGAACT TAAATTTAGG GATGTTTCTT TTAATGATAT TGGAAAAATG ATGAATACAG AAAGTTTTAA AGAACTAATA GAAAATCAGG CGATTAGGGT TCTTTTAGTT GCGGCACTTG CAAATCTTGG GAGCGCGATT GGAACTTTCT ATTTTGTACC GAGATTTTTA TAA
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Protein sequence | MYIRVNNGVT ECNIRLVGTA HVSDDSITDV ENAIVETDPE LVAIELDKDR FVAMFQNKKN DVDLKSVIKQ GKVGIFIVHS ILANFQKNIG EQFGIKPGSE MKKATDLAIQ YGKPLSLIDR PINITLSRTI NKMTFKEKFD FLVGLLTEQN VELDEKAVND MVSNADDLIL LLKDISPSIY ETLVDERDKY MAKNLFESSK GKENIVAVVG AGHVPGIKNY LKKMESGEDI ELKSLMEVKK KSNVLGKVIS IAILLIILYG FYSASSNLEA LKTLTLEWVL INGCLSSLGV LIARGKFQTM IAAFLAAPIT SLIPVIGAGY VAGLVELKFR DVSFNDIGKM MNTESFKELI ENQAIRVLLV AALANLGSAI GTFYFVPRFL
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