Gene MmarC6_0644 details

Gene Information

• Locus tag: MmarC6_0644
• ID: 5738926
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C6
• Kingdom: Archaea
• Replicon accession: NC_009975
• Strand: -
• Start bp: 592899
• End bp: 593588
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 641283110
• Product: zinc finger SWIM domain-containing protein
• Protein accession: YP_001548693
• Protein GI: 159905031
• COG category: [S] Function unknown
• COG ID: [COG4715] Uncharacterized conserved protein

Plasmid Coverage information

• Num covering plasmid clones: 44
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATAACG ACATCTACGA CGAAAGGGTC CAAGAACGGG GAAAAGAGTA TTTCTTAAAA 
AATATGGTAA AATACTGCAT AAAACGGGGA AATACTCTTC ATGGAACTGT TTATGGTAGT 
GATAATTACA TAACAAAAGT CGATTTAGAA ACAAATACTG GAGTATGTAC TTGCCCTTAT 
CAATTCAATT GTAAACATGC ATATGCACTT TTAGAGTCAT ACAAAAATGG AAAATATGTA 
AACGGGGATG AATTATTTTT AAATCTTTTA AAATTGGATA AAAAAGAGAT TTTAGACATT 
TTTGAAGACA TTATTAAAAA ACATAATTTA TGGGGTGAAT TTGTAAAAAC GGATGTAACG 
TTATTGGATA CTGCAAAAAA CATGCTTGAA CTTACAAAAA TGGAAAAGAA AAACCTATTT 
ACATTTACTT CGTTTTTAAG GAATCAATTT TTAAAAAATG CTGAAAACCA TGAATTACTT 
GAGATAATTC CTGATGTAAT TAAATATGTT CAGGAGAGAA AAAAGCTCGA AGAAATACTA 
TTTTTAATAG TTGATGAACT TTTCGAGCGT GGAAAAACAG ATAAAGATAT TTTGAAGAGA 
TTAATAGAAC TTTCCAGAAA ATATCGGGAG CTTTGGATGG TAAAGGATAA TATTTTGGAT 
TACGAGTATT TTGAACTTTT AGAGTATTAA 

 

Protein sequence

MDNDIYDERV QERGKEYFLK NMVKYCIKRG NTLHGTVYGS DNYITKVDLE TNTGVCTCPY 
QFNCKHAYAL LESYKNGKYV NGDELFLNLL KLDKKEILDI FEDIIKKHNL WGEFVKTDVT 
LLDTAKNMLE LTKMEKKNLF TFTSFLRNQF LKNAENHELL EIIPDVIKYV QERKKLEEIL 
FLIVDELFER GKTDKDILKR LIELSRKYRE LWMVKDNILD YEYFELLEY