Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0487 |
Symbol | |
ID | 5738493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 441965 |
End bp | 442729 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 641282949 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_001548537 |
Protein GI | 159904875 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3420] Nitrous oxidase accessory protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 0.503376 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTAAGA TTGGTTATAA ACCATTAATA GCTTTGGCTC TCGCATTATG TGTAGGAATA TCTATTGCGA GTGCTGCAAA AGAAGGAGTT CCTGGAACAA ATACTGTGTA CATTAATGAA ATTCCATATA ACATAACAGA CTCCGGAAAA TACTTATTAA ATATATCCAA ATCAGATATT TCAGGAACTG CAATAAAAAT AAATGCAAAC GATGTCATAC TCGATGGAAA CGGGCATTAT ATTGAAGGGG ATTCAACCGG TAGCACATCA TTTGTTACTG ATTTTGGAGT ATATGTATAT CCAAAAACAG GAGTTACAAT TCGGGATATG AATATATCAA GATTCGGTAG CGGAATATAT CTTGCAAATA CCTCAGAATG CACGATATTC AAAAATGATC TTTCGAAAAA CGATGTGGGT ATCCGGATGT GCAGGACAAA TGATAGCAAC ATAGACGATA ACGAAATATA TGGATGTACT GGGCCTTGGG GTATAGGAAT ATATTCAAGT TATTATGCAA ATGGGAACAA GATATTAAAC AACCTCGTAA ATAATAACGA TATCGGACTA AAATTTGCAG GGCTTGCAAT GGACAACAGA ATTATTTCAA ATGAGGTAAT GGACAACGAG AATTATGGTA TAATTCTCGG ATCCAATTGT GCCAATAATA GCATAATTGC AAATACCATA TTTAGCGATA CTGGTGACGA CCTTTCCCTT GCAAACGATT TGAACAAATT AAAAGCAAAC AAATACGATG AATAG
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Protein sequence | MTKIGYKPLI ALALALCVGI SIASAAKEGV PGTNTVYINE IPYNITDSGK YLLNISKSDI SGTAIKINAN DVILDGNGHY IEGDSTGSTS FVTDFGVYVY PKTGVTIRDM NISRFGSGIY LANTSECTIF KNDLSKNDVG IRMCRTNDSN IDDNEIYGCT GPWGIGIYSS YYANGNKILN NLVNNNDIGL KFAGLAMDNR IISNEVMDNE NYGIILGSNC ANNSIIANTI FSDTGDDLSL ANDLNKLKAN KYDE
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