| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0479 |
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| Symbol | |
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| ID | 5738468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 434652 |
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| End bp | 435413 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 641282941 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_001548529 |
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| Protein GI | 159904867 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1099] Predicted metal-dependent hydrolases with the TIM-barrel fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.671319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCGATT CCCACATACA TTCCGATACA AGACCTTACG AAGATTTTGA AGTTATGGCA
ACCGTTTTTG ACTGCGTTGT AACTCATGCA CACGATCCTT TAAGAATGAG GTCTTTTGAT
ACAGCACTTG ACTATTTCGA CAAGATTTTG AAGAGTGAAA TACCAAAAGC ACAGAAAAAT
GGTTTAAAAA TGAAAGCCTG TATTGGAATT CACCCAAGAG CAATTCCGCC AAAAATAGAT
TATGATGTTT TAAGAGAATA TCTAAAAAAA GAAAATGTTG TAGGTGTCGG CGAAATTGGG
CTTGAAAAAT GTAGCAAAGA AGAAATTGAA GTTTTTGAAA ACCAGATAAC TATTGCAAGA
GAAATGAATT TGCCTGCAGT AGTACACACT CCAAGAACGA ATAAAGAAGC TGTAACCAGA
AATATTATCG AAGTTCTCGA TACAATGGAT TTACCAATCG ATTTTAAGAA AAAAATAGTA
ATAGAGCACG TTACAAAAGA AACTGTGCCG ATTATATGGG AAAATGACTA TAGACTTGGA
ATTACTGTTC AGCCTCAAAA ATTAACTCCA AACGATGCTG TAGAAATACT TGGGGAATAC
TGCGAAAAGA GATTTTTATT AAATAGTGAT AGTTCTTCGG CTCCATCTGA TATACTTGGA
GTTCCAAAAA CTGTTCTGAA ATTAAAAATG GCAGGATTTG ACGAAAAAGT AATAAAAGCT
GTTTCCCATT ACAATGCAGC AACATTATTT AATATTAATT AA
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| Protein sequence | MIDSHIHSDT RPYEDFEVMA TVFDCVVTHA HDPLRMRSFD TALDYFDKIL KSEIPKAQKN
GLKMKACIGI HPRAIPPKID YDVLREYLKK ENVVGVGEIG LEKCSKEEIE VFENQITIAR
EMNLPAVVHT PRTNKEAVTR NIIEVLDTMD LPIDFKKKIV IEHVTKETVP IIWENDYRLG
ITVQPQKLTP NDAVEILGEY CEKRFLLNSD SSSAPSDILG VPKTVLKLKM AGFDEKVIKA
VSHYNAATLF NIN
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