Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0296 |
Symbol | |
ID | 5738970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 268897 |
End bp | 270351 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 641282760 |
Product | C/D box methylation guide ribonucleoprotein complex aNOP56 subunit |
Protein accession | YP_001548349 |
Protein GI | 159904687 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1498] Protein implicated in ribosomal biogenesis, Nop56p homolog |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTATTCA TTGCCTTTGC ACCATTTGGA GCATTTGCAC TTGAAGCGAA CTCGAAAAAC GGCGAATATT CATTAGACGA TATCAAATAT TACAAAATAT TTGAAAACGA GGATATTCCA AAAGTAATGT ATGAATTGAG ACAGGCGAAT TTTGAAATAA TCGATGAATT GAAAAACGAA TGGGAAATTG GGGAAGAAAG CGTTAGTTTT GAATACACGT CTTCCAAAAA TCCGCTCGGA GAACTTATTC GAGATAATTT GTACGAATTA GGTCAAAAAT ACGAAGTATT TGAAAGTGAA ACTGATTTTG TTTCAAAAAT GAATGCTTGG GCAACCTCTT TCACAAAATC GATGATGAAA AAATCATCAG AACAGAAAGA TAAATTGATA GTTCAGACGG TAAATGCTCT TGATAACCTT GATGAAACCC TAAATTTGTT TTCAGAAAGA CTTAGAGAAT GGTATTCACT TTATTTTCCA GAAATGGATA ATTTGATCAA GAAACACGAT ATTTACGTAG GACTGGTTTC CGAATACGGG GATAGGGAAG AGTATACTAG AACAAAACTC AAAAAAACAA TGCCTTCAAA TGTTGCAAGA ACCATTTCAC TTGCTGCAAA AGAATCAATG GGTGCAGATG TATCCGAATT TGATTTGGAA ATCATGAAAA ACCTTGCAAA TGAAATAAAA AGTATGTATG AATACAGAGA AAAATTGCAA GAATATCTTG AAACTTCAAT GAACGAGGTT GCTCCAAACT TGACGAAAGT TGCAGGTGCA TCACTTGGTG CAAGATTGAT AAGCCTTGCG GGTGGAATTG AAAGACTTTT AAGACTCCCT GCATCAACAA TACAAGTTAT CGGTGCAGAA AAAGCGTTAT TCGCACACTT AAGGGAAAGA GCATTACCTC CAAAACACGG GGTTATATTC CAGCATCCTT TGATACAGGG AAGTCCCTGG TGGATACACG GAAAGATTGC AAGAGCAATT TCCTGTAAAA TTTCAATTGC GATAAGGGCA GATGCTTTTG GAAATGATAT TTCTGACATG TTGATTGAAG ACATGAACAA AAAAGTAGCT GAAATAAAAG AAAAATTCCC TGAACCAATG AGAAAAAGAA GGCCAAGGCC TGATACGAGA AGTTTTGGTA ATAAAGGCGG CCAGGATAGG GATAGAAGGT CACAGGGTGA CAGAAAACCA TTCGATAAAA AAGGCGACTC CAAAAAAGGT GGAAAGCCAT TTGGTAAAAA ACCTGCTGGA AAGGGCGACA GACGAGATGA CCGAAGGGAC GATAAAAAAG GCGACAAGAA ACCATTTGGT GGAAAACCAA AAGGTAGTGG AAATGCTAGT GGAAATCAGC CTCCAAAGGA ACGATCTGGC GAAAAAAGAA GAGATTCAAC AAAAAAAGTT AAAGCTGAAA GAAAAGTGAT TGGAAAAACT TCTTCACAGA ATTAA
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Protein sequence | MLFIAFAPFG AFALEANSKN GEYSLDDIKY YKIFENEDIP KVMYELRQAN FEIIDELKNE WEIGEESVSF EYTSSKNPLG ELIRDNLYEL GQKYEVFESE TDFVSKMNAW ATSFTKSMMK KSSEQKDKLI VQTVNALDNL DETLNLFSER LREWYSLYFP EMDNLIKKHD IYVGLVSEYG DREEYTRTKL KKTMPSNVAR TISLAAKESM GADVSEFDLE IMKNLANEIK SMYEYREKLQ EYLETSMNEV APNLTKVAGA SLGARLISLA GGIERLLRLP ASTIQVIGAE KALFAHLRER ALPPKHGVIF QHPLIQGSPW WIHGKIARAI SCKISIAIRA DAFGNDISDM LIEDMNKKVA EIKEKFPEPM RKRRPRPDTR SFGNKGGQDR DRRSQGDRKP FDKKGDSKKG GKPFGKKPAG KGDRRDDRRD DKKGDKKPFG GKPKGSGNAS GNQPPKERSG EKRRDSTKKV KAERKVIGKT SSQN
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