| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0226 |
|---|
| Symbol | |
|---|
| ID | 5738703 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | + |
|---|
| Start bp | 207587 |
|---|
| End bp | 208768 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 641282690 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548279 |
|---|
| Protein GI | 159904617 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1800] Predicted transglutaminase-like proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTTT TTAAAGATTT AAAAAATAAA TATGTGAAAT GGCAGTCGTG CCCATCAAAT
GAAGATTTGA ATTTAAAAGA AATTAATGAG ATATCTAAAT ATTTAACTGG AAAAGATGAT
ACAGAAACGA TTACAAATAT ATTGGAATGG CAAGACCGAA ATATGGATTA TTGGTTCGAA
AAAGCCGATC TTCTTAGATC CATATGGGGT TCTTTTTGCT TAGTTATACT ATTGTTTATG
CCAAGTTTAA ACCCTTGGGG CATTATTCCC GATGGAATCT TTTTTAGAGC ATCAATCTTA
TTTTTAATAC CTTCTTTTAT TTTGTTATGT TTAACTTATT TTGAAGTAAT TGATTTAATA
ACCCTATTCT TCATATGTGG GGCATTTATG TTATTATGGG CATGCTTTGA ACCCATTACA
TATTCATTTT TAGGTAGTTG TTTATTATTT TCAGGAATTA TTTTTGGAGG GCTACTTTTA
TTTTTAAGTT ATATATGGAT AAAATACCCT CACCAATTGA AAAAAGGTAC TGAATACACC
AAAGAGGATT TATTAAGGTT GTTAAAACTG ACGTTTAAAT TAAAACTTTC CTTAAGAGAT
ATTTTAAAAT ATAAATGGGT AATATGCGGG GATTATGCGA AGTTGGGTTC TACAATGCTC
CTGAAATCTT TCCAAAAAAA AGACGTTTGT TTAATCGGTT TTGATAAACA TATTGCCTCA
GCAATATGTA TTGATAATAA ACTCTACGTA TTAGACCAAA AACTCCCATT AATACGTGCA
GATGCATGGC TTGAAAAATT TAAAAAAAAA AGTGCAGACG TTTATAAAAT CAGGGCTGAA
AAATCTGAAA TAACCTTTGA ATATTTGGGA AAATTCTCGG AAAAAATATG CTCAAAAGAA
ACCCCGATAT TAAATGAAAA CATATTTGGC AAGGCAAAAA TCATATCTGA TTTGGAAAAA
TCTTTAAAAA TAGAATTTAG CGGGGAAAAA TCCAATCCTG TAGAAATCAA CGATTTTCCT
AAAAATTTAG CGAAATACTA CGATGAAAAT ACGCATTTAT CGATAATAAG GCTTATTAGA
AATAGAATAG ACTCCGAATT AGGAATGAAT ATCGAAAGGA TAACAAATAT CGATTTAGAA
TTAGATAACG ACGATATTAA ACTTAAAATT TATTTAAAAT AA
|
|---|
| Protein sequence | MNFFKDLKNK YVKWQSCPSN EDLNLKEINE ISKYLTGKDD TETITNILEW QDRNMDYWFE
KADLLRSIWG SFCLVILLFM PSLNPWGIIP DGIFFRASIL FLIPSFILLC LTYFEVIDLI
TLFFICGAFM LLWACFEPIT YSFLGSCLLF SGIIFGGLLL FLSYIWIKYP HQLKKGTEYT
KEDLLRLLKL TFKLKLSLRD ILKYKWVICG DYAKLGSTML LKSFQKKDVC LIGFDKHIAS
AICIDNKLYV LDQKLPLIRA DAWLEKFKKK SADVYKIRAE KSEITFEYLG KFSEKICSKE
TPILNENIFG KAKIISDLEK SLKIEFSGEK SNPVEINDFP KNLAKYYDEN THLSIIRLIR
NRIDSELGMN IERITNIDLE LDNDDIKLKI YLK
|
|---|
| |