Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC6_0172 |
Symbol | |
ID | 5737992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C6 |
Kingdom | Archaea |
Replicon accession | NC_009975 |
Strand | - |
Start bp | 150405 |
End bp | 151151 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 641282637 |
Product | extracellular solute-binding protein |
Protein accession | YP_001548227 |
Protein GI | 159904565 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAAAG CTGTTCTAAT AATACTCTTT AGTATTTTAG TAATAACCTC TGCATGTACT GATACCAAGG GGCATTTTGA GTCAGACACG ATAACTGTTG GAATTTATCC TTACATGCCG CCATATCAAT ATTATGAGAA CGGCGAATTA AATGGGTTTG AAATAGAATT AATTTCTGAA ATTGCCAAAA GAATGGATAA AAAAATAGAA TTTGTTGAAA CCGATTATAA ATATGAAAAT TATATTGCAG CTAGCTCCGG ATCTTTCGAT GTTTCAATTT CAGCAATTAC TAAAACTACT TCAAGGGAAA AAGATTCAGT ATACTCCCAA CTCTACATGA ATTCTTATTC GTCCCTTGTA TGTTTGGATT CAAAATATTC TGGTCTAACA GATTTCGAGG GTAAAAAAAT AGGGGTGGTT GAAGACACGG TTTACGTCGA TCATGCAGAA TACTACAAAA AAAGTGTTAA TTTTGAAATT GTAAAATATC ATAATTATTA TAATTTAAAT TCAGCACTTT TGAATGGTGA TGTCGATGGA ATACTTACGG ATTATTTCGT CTGCAAATAT TTTATGAAAA ATAGTGCCGA TCTAACGATG ATTGAAAATA CCGAAATTCA CTACTTTGGA ATAGTTTCTT CAATGGACAA TGAAGATTTA ATAAATGATA TCGATGAAAC TTTAATAATG ATGTATAAGG ACGGAACATA CGATGAATTA CGGATAAAAT ACTTTGAAAT AGGATAA
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Protein sequence | MKKAVLIILF SILVITSACT DTKGHFESDT ITVGIYPYMP PYQYYENGEL NGFEIELISE IAKRMDKKIE FVETDYKYEN YIAASSGSFD VSISAITKTT SREKDSVYSQ LYMNSYSSLV CLDSKYSGLT DFEGKKIGVV EDTVYVDHAE YYKKSVNFEI VKYHNYYNLN SALLNGDVDG ILTDYFVCKY FMKNSADLTM IENTEIHYFG IVSSMDNEDL INDIDETLIM MYKDGTYDEL RIKYFEIG
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