| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0021 |
|---|
| Symbol | |
|---|
| ID | 5737960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C6 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009975 |
|---|
| Strand | - |
|---|
| Start bp | 18590 |
|---|
| End bp | 20101 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 641282489 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001548079 |
|---|
| Protein GI | 159904417 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.292089 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGTCGAAG ATAAAAAAAT ATGGTTAAAA ATTGATGGGG AACATGTTGT AGACCATAAT
ATTGACATAA AAAAATTTGC AAAAATATTG GAAACTTTTC AGCAGATCGC ATATAAATTA
AGACCAGATG AACAAGCGCC TGAATTATAT CAATTTTATT TAAATGATAT GAAACCAGGT
TCCGCTGATG TTTGTATGAC CGTATCTAAA ACTTTTGCGG GAGATTTAAA TAAGCCGTAC
AACGAATTAA CTAAATTTTA TTCAGGAATA AATGATTCTG AGGATATTGA AACTTTAAAA
GACCACGTAG ATAATAGTAT TGTCGAAGGT GAACCCAATA AACTCGTATC TAATCTCAAA
GACCTGTGGC CGAAAGATAA TGAAGTAATG GGAATCGCAT TATCTGAAGA ACAGCCTAAA
AATATTTCAG ATTATATTTT ATTCAAACCT GAAGCGAAAA AAAATATCAA TGAATTATAT
AATGAATACC ACAAGCCAGT TAGAAAAAAA ATGCACGGCA TATTGAGCAG GATAGCAACA
GATATTGACC AATTTGGATT TTTAACCTCT AAAAAAGATT TAATCAAAGG AAAATTTAAT
TTAAATCCTG AATTAAAAGA AGCATTGCTC GAAAATATGG AAAAACCTGT GGAAATTAAT
GGGGAGTATG ACAAAGCCAA CAAAAAATTT GTTAAACTTT ACTCCGTTTA TCCATCTAAC
CAGATATTTA TGGATTCAAT AGGGGAAATT TCATTACAGG GCCGAACTGA AAAAATATAT
GATAAAATTA ACATATATTT TGACAGTATT ATTTTTAAAA CTGAACAAAC AACCCTGGAA
AAAGTTTTTG AAGATAAAAC AGCGGTTTTT GATAATCTTA TGCATGACCT GAAATCGTCA
TTAGAATTCC ATCACAGGTC CGAAGAACGA AAAGAAGCTC TTTTAGATTA TTTTGAAGTT
TTAGAATCAA TTTTAAATAA CTACAAACCA ACAATGAATG AACTTTTGAA ATCTGCAAAA
GATATATTTA ATGACGAAAT TGTAAGTATT TTAGCTCCAA TCCCTGAAAG AATGATTAAA
TCTGGAAAAA CAAAATACAT TGGCAGTTTA ACCACTTATG ATGAACTACT TAAAATGTAT
GTCGGTAGAC TGGAATGTAA ACTTGAAAGT TTGGAAGATG AATTAATAGC ATTGTCGAAA
AAAACCCATA GGGCGGATTG TCCAGAATTC GATGTTAAAC GTACTGAAAC AATATCTGGA
GAATTTATGG GCTACAAACT AAAAAAAGAA ATGTTATTAA ATGTTTCATA TATCAAAAAT
GAAGAAATCT GGGAAATTTC ATTTAATGAT TTAAATTTAT TTGGAATTGG TGACACTTAC
GAATTAGCAA AAGAACATTT TGAATTATCT TTTGAAACAT TAATTGACGG TTACCTAAAA
TACCCTGATG AAAAATTAAG TAAAGATGGA TTGGAATTAA AAAACAGACT AATAACATAT
TTAGGGGAAT AA
|
|---|
| Protein sequence | MVEDKKIWLK IDGEHVVDHN IDIKKFAKIL ETFQQIAYKL RPDEQAPELY QFYLNDMKPG
SADVCMTVSK TFAGDLNKPY NELTKFYSGI NDSEDIETLK DHVDNSIVEG EPNKLVSNLK
DLWPKDNEVM GIALSEEQPK NISDYILFKP EAKKNINELY NEYHKPVRKK MHGILSRIAT
DIDQFGFLTS KKDLIKGKFN LNPELKEALL ENMEKPVEIN GEYDKANKKF VKLYSVYPSN
QIFMDSIGEI SLQGRTEKIY DKINIYFDSI IFKTEQTTLE KVFEDKTAVF DNLMHDLKSS
LEFHHRSEER KEALLDYFEV LESILNNYKP TMNELLKSAK DIFNDEIVSI LAPIPERMIK
SGKTKYIGSL TTYDELLKMY VGRLECKLES LEDELIALSK KTHRADCPEF DVKRTETISG
EFMGYKLKKE MLLNVSYIKN EEIWEISFND LNLFGIGDTY ELAKEHFELS FETLIDGYLK
YPDEKLSKDG LELKNRLITY LGE
|
|---|
| |