| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC6_0015 |
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| Symbol | |
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| ID | 5737951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C6 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009975 |
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| Strand | - |
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| Start bp | 12936 |
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| End bp | 14903 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 641282483 |
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| Product | helicase c2 |
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| Protein accession | YP_001548073 |
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| Protein GI | 159904411 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1199] Rad3-related DNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0747117 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCCCAG AATCTCCAAA TATGTTAGAA CACATCCCTG AAGACTTTAA GTACTGGAGA
AAGTACCAGC AGGAAAAAAT AGCAGAGATT CTAGACCATA TTTCAAACGG TAAGAAAATA
ATTGTTTTAA ATGCACCAAC AGGGGCTGGA AAATCACTTT ACAATATTTC AGTTGGTTCA
ATTTTAAATT CCTTGAACGA AAATAATAAT GCTTTTGTTT TAACTTCAAC AAAAATGCTT
CAAAACCAGT ATTCAGACGA GTTTCCGGAA GTAAGAGTAA TTAAGGGACG TGCAAATTAC
CCTTGCAAAT CCTGGGACTG GCTTTATAAT TTAAGAAAGA AAGAAGATGC AAAAAAAGGA
AAAATAACTG AAGAATACAA ACCAAAAACC TGTGAAGACT GCTACAAGAT TGCTAAAAAT
ACCAAATGCA ATTTTGAAGG GGTTTGTGAA TATAAACTTG CTAAAAAAGA AGCTCTCGAA
TCTACTTTTG CATGCATGAA TATGGCTTAT TTTATCCTCG CAGTCCCAAA TGAAGAAGTA
GGCTTTGAAA ACAGGACTTT ATGCATAATT GACGAAGCAC ACAACATTGA AGATACATTA
ATGAACCACT ATACGATTGA AATTACTAAA AAACGTGTAG AAAACTTAAG GAAAAGTTTA
AACGAACAAA AGGAAGTTAA ATTTCCAAAA GAAAAATGGA ATGGAATACT TTCCGTAAAT
CTCTATTTTA AAGATATTAT AAACTATGCA GTCGATGCAG CATTTGAAAA TATCTATGAC
GGGGAAGCTG AACTCTTGAA ATTTTTGAAA AAAACAGTTT ACAGCGATAT AACAATAATT
CTTGATAAGC CGTTGGTATC AAAAGATATC TATTTTATGA AAGTTAAAAA TCAAAAAAAT
CTAGTAAATA TGTCTAATTT AGAAAGAAAG CAGAAATTGA TTAGTTATTC AAAAATGTTT
TTACCATCAA ACTATATCGA CCTTTCAGAG TCTGAAACAA CAAGATTTAT GGATTCTATT
GAAAAGTATC AAAAAAGACT AAAAAATGCG ATAAATCTAT TCGATGATTT ATACAAAATT
GAAGAAATTC AAGAATCTGG CGAAATGGGT GCCAAATGGA TTCCAACGCA CGTTGAAAAA
AATTATGGAA AAAACGTTGG AACTTATTTA GAAAAAATCA TTTTAAAGCC AATTGATGTT
AAAGACTTAA AAGAAGAGCT GTTTGATCAG GCTGATTTTT ACATCTTATC ATCTGCAACG
CTTTCAAAAC AGCACATGAA AGATCTTGGA TTTAATGAAA AAGATTACGC TGTTGTAAGT
GTTCCTGCAT CTTTTCCCGT CAAAAACAGG CCTTTAAAAG TAATTACTGA ATTTAACATG
AACTATGAAA ATTTGAATAA AAAAGACTAT TTCAAAAAAA CCGTTGAAAA ATTGGATATA
ATACTAAACA ATCACGAAAA TGAGCGTGGA ATCATACACG TTTCATCAAA TAAGCTCATG
AATGATATTT TTAAAACATC GGTTCATAAA AACAGGATGA TAAAAGTAAC TTCGAATGGA
AATCTTATTG ACGGGATAGA ATCTATTGAT TCGGGATTAT ATTATCATGA AAAGAAGAAT
AACAGCGTTT TAATTTCGCC AAGTCTGCAT ACCGGGGTTG ATTTTAAAGA TGATAAAGCA
AGATTTCAAA TTATTTTTAA AGTTCCGTTT CTTGCGGGAG ACGAACAAGT GTCTGCTAGA
CGAAGGAAAG ATCAAAACTG GTATTTTGGA AAAGCAGTAA CCCAGATGAT TCAGTCGTAC
GGGAGAACCA CCCGTTCAGT TGATGATTAT TCGGTAACTT ATATTTTAGA CAAACGTGCA
CTTCATTATT TAAAAAATGA TAATTTTACT CCCGATTGGG TAAAAGAAGC TGTCATTAAA
TACGATACTG TCGAAGACGC TTTGGAAGAT AACATAAGTG AAAAATAA
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| Protein sequence | MIPESPNMLE HIPEDFKYWR KYQQEKIAEI LDHISNGKKI IVLNAPTGAG KSLYNISVGS
ILNSLNENNN AFVLTSTKML QNQYSDEFPE VRVIKGRANY PCKSWDWLYN LRKKEDAKKG
KITEEYKPKT CEDCYKIAKN TKCNFEGVCE YKLAKKEALE STFACMNMAY FILAVPNEEV
GFENRTLCII DEAHNIEDTL MNHYTIEITK KRVENLRKSL NEQKEVKFPK EKWNGILSVN
LYFKDIINYA VDAAFENIYD GEAELLKFLK KTVYSDITII LDKPLVSKDI YFMKVKNQKN
LVNMSNLERK QKLISYSKMF LPSNYIDLSE SETTRFMDSI EKYQKRLKNA INLFDDLYKI
EEIQESGEMG AKWIPTHVEK NYGKNVGTYL EKIILKPIDV KDLKEELFDQ ADFYILSSAT
LSKQHMKDLG FNEKDYAVVS VPASFPVKNR PLKVITEFNM NYENLNKKDY FKKTVEKLDI
ILNNHENERG IIHVSSNKLM NDIFKTSVHK NRMIKVTSNG NLIDGIESID SGLYYHEKKN
NSVLISPSLH TGVDFKDDKA RFQIIFKVPF LAGDEQVSAR RRKDQNWYFG KAVTQMIQSY
GRTTRSVDDY SVTYILDKRA LHYLKNDNFT PDWVKEAVIK YDTVEDALED NISEK
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