Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1820 |
Symbol | |
ID | 4927889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1767371 |
End bp | 1768471 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 640167342 |
Product | carbamoyl phosphate synthase small subunit |
Protein accession | YP_001098331 |
Protein GI | 134046846 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACGGAA TTTTAGTTTT GGAAGACGGC ACCATCATCA GAGGGGATGG ATTTGGTGCA GAAACCGAGG TACTCGGTGA ACTTGTATTT AACACTTCCA TGACAGGATA TGTTGAAATA TTGACTGATC CTTCATACAA GGGCCAGATT GTTACAATGA CGTATCCCTT GGAAGGAAAC TACGGTGTTG AAAAAGAATG GTTTGAAAGT GACGGAATTA AAGCAGAAGG ATTCGTTGTA AAAGATATGA CTGGATCAAA ACTCGACGAA TTTTTAAAAG AATACAATAT TCCCGGAATT TCAGGCGTAG ACACAAGATA CATTACGAGA AAAATAAGAT CAAAAGGAGT TATCAGATCC CTCTTAAAAA CGTCCACCAA CCCGATAACT AAAGATGAAG AAACAGAATT AATTAAAAAA GTAGTAGAAT ATCCAGATAT TTCAGAAATT GACCTTGTTC CTGAAGTGTC AACCAAAGAA ACAGTTATAT ACAACGCAGA AGATGAAAAA ACTAGGTGTG TTCTTATCGA TTGTGGTGTA AAACAGAGCA TTATAGACTG CCTTGTTGAA AGAGGATGCA GTGTTGTAAA AGTTCCATAC AATTCTAAAG AAGAAGAAAT TATGTCATAC AACCCCGACT TCGTGCTTGT TTCAAACGGT CCAGGAGACC CTGAAAACAT GGCCGAAACG GTTGAAACTG TTAAAAACTT AATTGGAACA CTTCCAGTTA CCGGAATTTG TCTTGGACAT CAATTAATTA CAATTGCACT TGGCGGAAAA ACTTACAAGT TAAAATTCGG TCACAGGGGC GGAAATCAGC CTGTAAAAGA TATTGACTCT GGAAAAGTAT ACATCACATC CCAAAACCAT GGATTTGCTA CTGATGATAA AATAGTTCCA GAAGGTTCTG AATTAATGCA CATGAACTTA AACGATGATA CCGTTGAAGG AATAAGAAAA ATTGAATCAA ATGACCTCAA AAATACAGTA TGGAGTGTTC AGTACCATCC TGAAGCAGGT CCTGGACCAC ATGACGCACG GTTCCTCTTT GATGAAATGG TTGAACTTGG AATTAAATTT AAAGCTGAAA AAGCAAACTA A
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Protein sequence | MYGILVLEDG TIIRGDGFGA ETEVLGELVF NTSMTGYVEI LTDPSYKGQI VTMTYPLEGN YGVEKEWFES DGIKAEGFVV KDMTGSKLDE FLKEYNIPGI SGVDTRYITR KIRSKGVIRS LLKTSTNPIT KDEETELIKK VVEYPDISEI DLVPEVSTKE TVIYNAEDEK TRCVLIDCGV KQSIIDCLVE RGCSVVKVPY NSKEEEIMSY NPDFVLVSNG PGDPENMAET VETVKNLIGT LPVTGICLGH QLITIALGGK TYKLKFGHRG GNQPVKDIDS GKVYITSQNH GFATDDKIVP EGSELMHMNL NDDTVEGIRK IESNDLKNTV WSVQYHPEAG PGPHDARFLF DEMVELGIKF KAEKAN
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