| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1792 |
|---|
| Symbol | aspC |
|---|
| ID | 4927917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1742554 |
|---|
| End bp | 1743870 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640167314 |
|---|
| Product | aspartyl-tRNA synthetase |
|---|
| Protein accession | YP_001098303 |
|---|
| Protein GI | 134046818 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0017] Aspartyl/asparaginyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00458] aspartyl-tRNA synthetase, archaeal type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTATTTAA TAGCAGATTG GAGAAGAACT CACTACTCAG AAGAAGTAAT TCCTGAAATG
GACGGTCAGG AAGTTATTTT GATGGGTTGG GTTCACTCAA TAAGGGCGTT AGGAAAACTC
GCATTTGTAA TTTTGAGAGA CAGGGAAGGA ACAATTCAAG CAGTAGTTCC AAAACAGAAA
GTTGACGAAG AAACATTTGC AATCGCAAAA AAATTGGGAA AAGAAGACAT AATTGCAATT
AGGGGAAAAG TAGTTGCAAA CGAAAAAGCT CCAAAAGGAT TTGAAGTAAT TCCTATAGAA
ATAAGAGTTC TTAACAAAGC TGATGCACCG CTTCCACTTG ATCCTTCAGA AAAAGTTGCT
GCAGAAATCG ATACAAGACT CGACAAAAGG TTTTTAGATA TCAGAAGACC AAAAATTCAG
GCAATATTTA AAATAAGATC TGAAATGTTA AGGTCAATTA GAAAAACATT TGCAGACGGC
GGATTTGTTG AGGTAAACAC TCCAAAATTG GTTGCAAGTG CAACAGAAGG TGGAACTGAA
TTATTCCCTA TTTCATACTT TGAAAAAGAA GCATTTTTAG GTCAAAGCCC ACAGCTTTAC
AAACAGATGA TGATGGCTGG TGGATTCGAC AAAGTGTTCG AAATTGCACA GATTTTCAGG
GCAGAGGAAC ACAACACGAG AAGACACTTA AACGAAGCAA TTTCAATCGA TACAGAAATG
TCATTTGTAA ACGAAAAAGA TGCTATGGCA ATGCTTGAAA AAGTAGTTTA CAATTGTTAC
GCAGATATCG AATACAACAG ACCTCAAGAA ATTGAACTTT TAGAATTAAA CTGGGAAATT
CCTGAAAAAA CATTCGATAA AATAACTTAC ACCGAAGCAA TCGATATTGC AAATGCAAAA
GGCGTAGAAA TTGAATGGGG AGAAGATTTA TCAAGAGCTG CTGAAAGAGC AGTTGGTGAC
GAAATGGGCG GCCTTTACTT TATTACTGAA TGGCCAACAC AGACAAGACC ATTTTACACC
CTTCCACACA AACACGACAA TAAAGTTTGT AAAGCATTTG ACTTGATGTA CAAAGAACTT
GAAATATCAT CAGGAGCTCA AAGAGTTCAC AAATACGACC TTTTAGTTGA AAACATCTCA
AACATGGGCA TGAATCCAGA TTCATTTGAG ACTTACCTTG AAGCATTCAA ATTTGGAATG
CCTCCACACG CAGGATGGGG ACTTGGTGCT GACAGGTTTG CAATGGTTTT AACCGCACAG
GATAACATCA GAGAATGTGT GTTATTCCCA AGAGACAGGC AAAGATTAAC TCCATAA
|
|---|
| Protein sequence | MYLIADWRRT HYSEEVIPEM DGQEVILMGW VHSIRALGKL AFVILRDREG TIQAVVPKQK
VDEETFAIAK KLGKEDIIAI RGKVVANEKA PKGFEVIPIE IRVLNKADAP LPLDPSEKVA
AEIDTRLDKR FLDIRRPKIQ AIFKIRSEML RSIRKTFADG GFVEVNTPKL VASATEGGTE
LFPISYFEKE AFLGQSPQLY KQMMMAGGFD KVFEIAQIFR AEEHNTRRHL NEAISIDTEM
SFVNEKDAMA MLEKVVYNCY ADIEYNRPQE IELLELNWEI PEKTFDKITY TEAIDIANAK
GVEIEWGEDL SRAAERAVGD EMGGLYFITE WPTQTRPFYT LPHKHDNKVC KAFDLMYKEL
EISSGAQRVH KYDLLVENIS NMGMNPDSFE TYLEAFKFGM PPHAGWGLGA DRFAMVLTAQ
DNIRECVLFP RDRQRLTP
|
|---|
| |