| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1783 |
|---|
| Symbol | |
|---|
| ID | 4927930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1735193 |
|---|
| End bp | 1735954 |
|---|
| Gene Length | 762 bp |
|---|
| Protein Length | 253 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640167305 |
|---|
| Product | putative monovalent cation/H+ antiporter subunit B |
|---|
| Protein accession | YP_001098294 |
|---|
| Protein GI | 134046809 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2111] Multisubunit Na+/H+ antiporter, MnhB subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTCAAA AAAGAGAAAT CGCAGTTTTT CTTTCATTTG TGTTCTTTGG ATCGGCAATA
CTCTATTCAT TATTTAATAT AAATGTCGTA GAAGGTGTAA ATTACATTTA CACTCAAAAT
TATATCGTTC CAAACCTGAT AACGGCAGTT CTGTTCGACT GGAGAGGTTT TGATACTTTA
GGGGAATGTA TGATTCTTGT AACCTCCGTT TTAGTTACTG GAATGGTTTT TGGAAGAGGA
TTATTCGAAA CAGAATTTTT AAAAGAAGTT TATTCAAATT CTAAAGAAGA ATCAGACGCC
GAAATTGGAT TTACTTCAAT AATTAAGGTT TTAGCAATGC CTTTAAGTAT TTTACTAATG
GCTTTGGGAA TTACTATAAT TTTGGGCGGA CATATAACTC CAGGTGGAGG ATTCCAGGGC
GGTTCATTAA TTGCAGCAGC ATATATTTTA AGTATCGTTG CATTTGGATC AAAAACTCCA
ATTAAATTCA AACACCACTT TTTAGAGTCT TTAGAATCAT TTGGAGCAAT ATTATTCATG
TCATTAGGTG TTCTTGGAAT AATTGTTTCA GGATTTTATC TCTTTAATTT TGGAGATTTA
TTTGGATATC CTGTATTTTT ATCCCCTTCA GGACTTGAAA ATACTGGAAT TATTCCTTAT
TTAAATATTG CAGTAGGTTT AAAGGTTTTA GCAGGTCTTT CAACAATTAC ATTCCTATTA
ACTGGTGAAA AGGTAGTTAA AGACTACATC GTCAGGGAAT AG
|
|---|
| Protein sequence | MTQKREIAVF LSFVFFGSAI LYSLFNINVV EGVNYIYTQN YIVPNLITAV LFDWRGFDTL
GECMILVTSV LVTGMVFGRG LFETEFLKEV YSNSKEESDA EIGFTSIIKV LAMPLSILLM
ALGITIILGG HITPGGGFQG GSLIAAAYIL SIVAFGSKTP IKFKHHFLES LESFGAILFM
SLGVLGIIVS GFYLFNFGDL FGYPVFLSPS GLENTGIIPY LNIAVGLKVL AGLSTITFLL
TGEKVVKDYI VRE
|
|---|
| |