| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1642 |
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| Symbol | |
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| ID | 4928905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1579886 |
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| End bp | 1580782 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640167148 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001098153 |
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| Protein GI | 134046668 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.226081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTCA AAAAATACCT AGATCATTTT TACCATGTTT TGATTATAAG GAATTTGAGA
ATACTGAAAA AAACAGGTCG AAAACTTGAT GAACGGGTAT TTATAGGTAT TTTGTTAATC
ATTACTGTTT TGCCGATTTT GTTGAAAATA TTCTTAGGTT TCACATTAAA AACCACATTA
ATATTGACTT TCGTATATTT AGGTTCTGTT CTTTCACTAC CTACAATAAT GTATGAATCT
AAAATGGATA AATTTGACAA AAATATACCA AAAGCCCTTT ATGTGATGGT TTTATCACTT
GATTCTGGAC GTTCTGTTGT TGAAGCGATA AATGAAGTTA TAAGAAGTGG AATTCCTGAA
GTAGATGTCG TATTCTCAAA AGTAGTCACT TTGATGACTG AAAGAAAATT GAGTTTTGAA
GATGCAATGA TTCTTGTTTC AAATTCACTT GATTCAAAGA TTTTCAGGCA GGTTGGAAGG
TTGATTATTG AAAATAGAAA GTATGGTGGG GAACTTGCAG ATACATTGAA AAAACTTGCT
AAAACACTTG AAGATCTCCA GAATTTAAAG TCCCAGCTTA TGAGTGTAAC TGCAAATGGT
CTTGCTGTTG GTCTTATTAT TCTTTGTGGT GTGATTCCTG CAACTGCAGG TTTGATAGGT
GGTTATTTAA CCGTTATATC ACAATTAGCA CCAACAATGC CTTCGGTTGA AGCTTCGCAG
ATTTCAAAAG CTATTGAAAC GATTCAGATA GGTTCTGGAT TATTCGGACT CTTCTTTGCA
GTTCCTTTGT TTGGTTTAAA AATTAATAGG ATGATAATTA CTTGTTCAAT ATGTATGACT
TTTGCAATTG CCACATTTTA CGCCGTTTTA AGACTTACTG GAATGTTATT TGCTTAA
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| Protein sequence | MDVKKYLDHF YHVLIIRNLR ILKKTGRKLD ERVFIGILLI ITVLPILLKI FLGFTLKTTL
ILTFVYLGSV LSLPTIMYES KMDKFDKNIP KALYVMVLSL DSGRSVVEAI NEVIRSGIPE
VDVVFSKVVT LMTERKLSFE DAMILVSNSL DSKIFRQVGR LIIENRKYGG ELADTLKKLA
KTLEDLQNLK SQLMSVTANG LAVGLIILCG VIPATAGLIG GYLTVISQLA PTMPSVEASQ
ISKAIETIQI GSGLFGLFFA VPLFGLKINR MIITCSICMT FAIATFYAVL RLTGMLFA
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