| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1410 |
|---|
| Symbol | |
|---|
| ID | 4927599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1352055 |
|---|
| End bp | 1352984 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640166906 |
|---|
| Product | tyrosyl-tRNA synthetase |
|---|
| Protein accession | YP_001097922 |
|---|
| Protein GI | 134046437 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0162] Tyrosyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAAT CTATATTAAA AAACACTTCA GAAATTGTAT CAAGCGAAGA ACTAGCTGAA
CTTTTAAAGA AAGAAGAAAA AATTGCATAC ATCGGTTTTG AACCAAGTGG TAGAATTCAC
ATGGGCCATT ACTTGCAGAT AAGAAAGATG ATCGATCTTC AAAAGGCAGG ATTTAAAATA
TTAATATTAT TGGCAGATTT ACACGCATAC TTAAACCAAA AAGGAACGAT GGAAGAAGTA
AGGGCTCTCG GCGAAGAAAA CAGGAAAGTA TTCGAAGCAA TGGGTCTTGT TGCAGATTAT
GTTTATGGAA GCGAGTTCCA GTTAAAAGAC GAGTATACAA TAGACGTTTA CAAACTCGCA
CTTTCAACCA CATTAAACAG GGCAAGAAGG AGCATGGAAG TAATTGCCAG AGAAGACGAA
AATCCGAAAG TCGCAAGTGT GGTATATCCA TTAATGCAGG TAAACGATAT AAAACACTTA
AATGCGGACG TTGCAGTTGG TGGAATGGAG CAGAGAAAAA TTCACATGCT TTCAAGGGAA
ATTTTGCCTA GCATGGGATA CAAAGCTCCA GTATGCATAC ACAACCCTGT TTTAACTGGA
CTTGATGGCG AAGGCAAGAT GTCTTCCTCA AAAGGAAACT TCATTGCAGT AGATGACGAT
GAAGCTACAA TTAAGAAAAA AATGAAAAAC GCATTTTGCC CTATGAAAGA AGTTTCGGGA
AACCCGGTTT TGGAAATTGC TAAATACTAT ATCGAATACC CTGCAACTGT GAAAAGGCCG
GAAAAATTCG GTGGAGATTT AGTTTTAGAA TCTTACGAAG CTTTAGAAAA TGCATTTGTT
GAAGGACTTC ACCCAATGGA TGTTAAAAAC CTCGTTTCAG ATCAATTAAT TGAAATTTTA
AGACCGATTC GTGAAAAAAT GAATGAATAA
|
|---|
| Protein sequence | MLESILKNTS EIVSSEELAE LLKKEEKIAY IGFEPSGRIH MGHYLQIRKM IDLQKAGFKI
LILLADLHAY LNQKGTMEEV RALGEENRKV FEAMGLVADY VYGSEFQLKD EYTIDVYKLA
LSTTLNRARR SMEVIAREDE NPKVASVVYP LMQVNDIKHL NADVAVGGME QRKIHMLSRE
ILPSMGYKAP VCIHNPVLTG LDGEGKMSSS KGNFIAVDDD EATIKKKMKN AFCPMKEVSG
NPVLEIAKYY IEYPATVKRP EKFGGDLVLE SYEALENAFV EGLHPMDVKN LVSDQLIEIL
RPIREKMNE
|
|---|
| |