| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1341 |
|---|
| Symbol | |
|---|
| ID | 4928155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1287288 |
|---|
| End bp | 1288001 |
|---|
| Gene Length | 714 bp |
|---|
| Protein Length | 237 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640166837 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001097853 |
|---|
| Protein GI | 134046368 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1836] Predicted membrane protein |
|---|
| TIGRFAM ID | [TIGR00297] conserved hypothetical protein TIGR00297 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.328913 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGACATGT TATTGAAGAT AATTTACTCT GCATCTATTA CGTTGATACT CGCGGCACTA
ATTCATAAAA AGAAGTACCT CGATAAATTA GGAATAGTTG GATCTTCGAT AATGGCATTT
ACGATATTAT TTTTAGCAGA TTTAAAGTGG TTATTGCTTC TTATCACGTT TTTAGTCCTT
GGAAGCCTCG TAAGTAAAAT GGGTTACGGT TTTAAAAAGA CAATAAAAAT GGCGGAATCA
AGAAGATCAT TAAAAAACGT GCTTGCAAAT GGTTTGATGG CAGTTTTATT TGTTTTGGCT
TATTCTACAG GTTTAATTAC TGAACAAATG GCTCTTGTTG GATATATCGG AGCTATTGCA
GCTGCAAATT CTGATACGTT TTCATCAGAA CTTGGGATGC TTTCAAGGGA AACTCCAAGA
CTTATAACAA ATTTCAAAAC TGCAAAAACA GGAACTGATG GTGCAATAAC GGTTTGTGGA
ACTTTTGCCG GGTTACTCGG TTCTTTTTTA ATAGGAATAC TTGCATACGC TCTTTTTAAT
GATACTGCAA TATTTTGGAC TGCAACGATT TCTGGAATGA TTGGAAACTT TGCAGATAGT
TTACTCGGCG CCATTTTTGA GAGAAAAGGA TTAATGAATA ATGAACATGT CAATTTCATG
GCAACACTCA GTGGCGGAAC TTTTGCAGTT TTATTTTATC AGCTTATTAT TTAG
|
|---|
| Protein sequence | MDMLLKIIYS ASITLILAAL IHKKKYLDKL GIVGSSIMAF TILFLADLKW LLLLITFLVL
GSLVSKMGYG FKKTIKMAES RRSLKNVLAN GLMAVLFVLA YSTGLITEQM ALVGYIGAIA
AANSDTFSSE LGMLSRETPR LITNFKTAKT GTDGAITVCG TFAGLLGSFL IGILAYALFN
DTAIFWTATI SGMIGNFADS LLGAIFERKG LMNNEHVNFM ATLSGGTFAV LFYQLII
|
|---|
| |