| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1183 |
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| Symbol | |
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| ID | 4928810 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 1135069 |
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| End bp | 1135617 |
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| Gene Length | 549 bp |
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| Protein Length | 182 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640166674 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001097695 |
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| Protein GI | 134046210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.172302 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACACGGC ACTATTGTAA AGACTGGCTC ACAAAAGACG AGTTAAAAGT ATTTATCGAT
TCGGTAGACT CTACAGAACA TAAATTGTTC TTTAAAATGC TCTATGGAAT GGCACTCAGG
GTCTCAGAAC TCCTAACAAT TGAAGTAAAA AACATAAATT TAAACGAAGG TGTTTGTAAA
TTACTGGACA CTAAAACCGA AACATTCCAA ATCTGCGTTA TTCCAGAGTG GTTAAACGAA
GATATTTTCG GACATATCGT CGATAACAAT TTAAAAGATG ATGACCGACT TTTTAAGTTC
AAAAACCGGA CATATGCTTG GGAACTCGTT AAAAAATATA CTAAAAACGC TAAAATTCAT
AAAGAGTTTT CAACCCATAC ATTCAGAAGA AGTAGGGCGC TACACCTGTT AAATGATGGA
GTTCCGCTTG AAAAAGTGAG TAAATATTTA AGGCACAAGT CAATAAACAC TACAATGCAC
TACCTGAAAA TTACAGTTGA CGACATTAAA AAGGAACTCG TCAAAATTGG AGATTGGTAC
GATCTTTAA
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| Protein sequence | MTRHYCKDWL TKDELKVFID SVDSTEHKLF FKMLYGMALR VSELLTIEVK NINLNEGVCK
LLDTKTETFQ ICVIPEWLNE DIFGHIVDNN LKDDDRLFKF KNRTYAWELV KKYTKNAKIH
KEFSTHTFRR SRALHLLNDG VPLEKVSKYL RHKSINTTMH YLKITVDDIK KELVKIGDWY
DL
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