Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0905 |
Symbol | |
ID | 4928871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 887083 |
End bp | 887760 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640166403 |
Product | 30S ribosomal protein S3Ae |
Protein accession | YP_001097426 |
Protein GI | 134045940 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1890] Ribosomal protein S3AE |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAGAA TGAAAGCTAG GTCCGCTAAA GGAAAAAGAG TGGCCAAAGA TACATGGAAA TCCAAAGTAT GGTACGATAT TTACACACCA CAATCATTTG GTGGAGACGT AATCGGACAA ACCCCTGCAA ACGATCCTGC AACTTTAATC GGTAGGATTT CAGAAATCAG CTTAAGAGAC TTAACTAACG AACATTCAAA ACACATGACA AGAATGTACT TCAAAGTTGA TGGCGTAAGT GGAAACAACG CTACATCACA GTTTGTAGGT CACGACACAA CAAGAGAATA CTTAAAATCA CAAGTTAGAA GAAGAAGAAG CAAAATCAAC GCAATCGTTG ATGTAAGAAC AAAAGATGGT TTCAAAGTAA GAGTTAAAGC ATTAGTTTTA ACAGCTGTAA GAGCAAGAGA CCACCACAAA ACAGAAATTA GAATTAACAT GGAACAAATC ATCAGACACA TGGCAAAAGA AACAGCATTC GCTGAATTCG TACACGCTAT GTTAATGGGT GGCTTAGGTT CAAAAATCTA CGGCGACTGT AAAAAAATGT TCCCATTAAA AAGAGTAGAA ATCTTCAAAT CAGAAGTTTT AGAATTTGGA AAAGCTGTTG AAGCACCTGT AGAAGAACCT GCTGCTGAAG AAGTAGCAGA AGCACCTGCT GCTGAAACAC AAGAATAA
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Protein sequence | MARMKARSAK GKRVAKDTWK SKVWYDIYTP QSFGGDVIGQ TPANDPATLI GRISEISLRD LTNEHSKHMT RMYFKVDGVS GNNATSQFVG HDTTREYLKS QVRRRRSKIN AIVDVRTKDG FKVRVKALVL TAVRARDHHK TEIRINMEQI IRHMAKETAF AEFVHAMLMG GLGSKIYGDC KKMFPLKRVE IFKSEVLEFG KAVEAPVEEP AAEEVAEAPA AETQE
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