Gene MmarC5_0470 details

Gene Information

• Locus tag: MmarC5_0470
• ID: 4929177
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 427863
• End bp: 428522
• Gene Length: 660 bp
• Protein Length: 219 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640165973
• Product: ribulose-5-phosphate 3-epimerase
• Protein accession: YP_001096999
• Protein GI: 134045513
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0036] Pentose-5-phosphate-3-epimerase
• TIGRFAM ID: [TIGR01163] ribulose-phosphate 3-epimerase

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.0944397
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGTAATGA TTGGTGCATC CATTCTTTCT GCAGATTACG GGCATATGGA ACAAGAAGTA 
AAAAAAGCCG AAGAAGGAAA TATTGATTTC TTTCACGTTG ATATAATGGA CGGACACTTT 
GTACCGAACT TAAGTATGGG GCTTAGGGTT CCCCACTATT TGAAAAGTAT AACTGACGTT 
CCAATTGACG TACATTTAAT GGTTGAAAAT CCCGAGTTAT TTATTCCTAA ACTGGCAGAT 
GCTGCAGATA TAATTGCATT TCACGCAGAA TCCAGCAAAT ATTTATTTAG AACTGTTGAC 
ATGATAAAAG AACACGACGC AAAGCCAATA GTTGCATTAA ATCCCTCAAC ACCAATCGGT 
AACGTGGAAT ACGTTTTAGA AAATCTGTAT GGTGTTTTGG TGATGACAGT TGAGCCAGGT 
TTTTCAGGGC AGTCTTTTAT AAATCCAATG CTTAAAAAAA TAGATAATTT AAAAAACAAA 
ATATTGACTG AAGGCTACAA TACAAAAATC TTTGTAGATG GTGGAATTAA TCTGGAAACT 
GCACCAAAAG CTGTTGAAGC AGGGGCAGAC GCATTAATTG CAGCTTCAGC AATATATGGG 
AAGGAAGATG TTAAAAAAGC AGTAAATGAT TTAAGAAATT CTGCAAACTT TAAAATTTAA 

 

Protein sequence

MVMIGASILS ADYGHMEQEV KKAEEGNIDF FHVDIMDGHF VPNLSMGLRV PHYLKSITDV 
PIDVHLMVEN PELFIPKLAD AADIIAFHAE SSKYLFRTVD MIKEHDAKPI VALNPSTPIG 
NVEYVLENLY GVLVMTVEPG FSGQSFINPM LKKIDNLKNK ILTEGYNTKI FVDGGINLET 
APKAVEAGAD ALIAASAIYG KEDVKKAVND LRNSANFKI