| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0452 |
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| Symbol | |
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| ID | 4928719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 410026 |
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| End bp | 410556 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 640165956 |
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| Product | tRNA-splicing endonuclease subunit alpha |
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| Protein accession | YP_001096982 |
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| Protein GI | 134045496 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1676] tRNA splicing endonuclease |
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| TIGRFAM ID | [TIGR00324] tRNA intron endonuclease |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAC CTAAAAAGAC AATACCTGCA AAACTCTCGG ACGAGAGAAT TGTGATTTAC
GATAAAGATG GAATATCCCG TTTAAACGAA AAAAGATACG GAGAACTTCA CGAAAATTTT
TTGTCGCTCT CATTTGTAGA GGGGCTCTAC CTCGTATCAA AAAACTGGAT ATCTTTGAAA
GATAAAAAAA ATAAACTGCT TTCATTTGAA GAAGTATACG ATGTCGCACA GAATATCGAT
AGAAAATTGT GCATTCGATA TTTGGCATAT AAAGACCTCA GAAACAGAGG ATATACTGTT
CGAACTGGTT TAAAATACGG CTCTGATTTT AGACTTTACG AAAGAAGCAA TATTGATGAA
ATTCACTCGA GATACCTTGT AAAAGTGTTC TCAGAAGAAA TTCCTTGTGA AATTTCAGAA
ATTACTGGAT TTGTTAGGGT TGCACACTCA GTTAGAAAAG AATTAATTAT TGCGATAGTT
GATGCTGATG GAAGCGTCGT TTACTATAAC ATGGGATATT TAAAGCTTTA A
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| Protein sequence | MAKPKKTIPA KLSDERIVIY DKDGISRLNE KRYGELHENF LSLSFVEGLY LVSKNWISLK
DKKNKLLSFE EVYDVAQNID RKLCIRYLAY KDLRNRGYTV RTGLKYGSDF RLYERSNIDE
IHSRYLVKVF SEEIPCEISE ITGFVRVAHS VRKELIIAIV DADGSVVYYN MGYLKL
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