Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0379 |
Symbol | |
ID | 4928626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 339819 |
End bp | 340868 |
Gene Length | 1050 bp |
Protein Length | 349 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 640165884 |
Product | hypothetical protein |
Protein accession | YP_001096910 |
Protein GI | 134045424 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG3425] 3-hydroxy-3-methylglutaryl CoA synthase |
TIGRFAM ID | [TIGR00748] hydroxymethylglutaryl-CoA synthase, putative |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAAG TAGGTATTGT AGGATATGGA AGTGACCTTC CAAAATATAG AATAAAAGCG GAAGATATCG CTGGTGCTTG GGGTAAAGAC GCTCAAGCAA TCAAAAGAGG TCTTGTTGTA AACGAAAAAA GCGTTCCAGG ACCTGACGAA GATACTGCAA CAATATCAGT ACAGGCTGCA AGAAGAGCAT TATCAAGAGC AGGAATTAAC CCAAAAGATA TTGGCGCTGT TTACGTAGGA AGTGAAAGCC ACCCTTATGC AGTAAAACCA ACATCAGGAA TCGTTGCTGA AGCATGTGGT GTATCACCAG ACTTTACCGC AGCAGATTTA GAGTTTGCAT GTAAAGCAGG AACTGCGGGA ATGCAAATGT GTATGGGTTT AGTTGGAAGC GAAATGATGG AATATGCTAT GGCAGTTGGT GCGGATACTG CTCAGGGAGC TCCAGGAGAT GCTCTTGAAT ACACTGCTGC TGCAGGTGGT GCTGCATACA TCATCGGTGC TAAAAAAGAA GAATTTATCG CTAAATTCAA CGGAACATAC TCTTACACCA CAGATACCCC AGATTTCTGG AGAAGAGAAC ATGAACACTA CCCAAAACAC GGTGGTAGAT TTACAGGAGA ACCTGCATAC TTCAAGCACG TTTTAAACGG TGCAAAAGGC ATGATGGCAA AAATGGATAC TACTGCAAAA GATTACGATT ACTGCGTATT CCACCAGCCA AATGGAAAAT TCTACATAAG CGCAGCTAAA CAGTTAGGAT TTACCGAAGA ACAGTACAAA TACGGACTTT TAACACCATA CTTGGGAAAC ACCTATTCAG GAGCTGTTCC ACTCGGACTT TCAAATATTT TAGACCATGC GAAAGCAGAT GACAGAATCT TCGTTGTATC ATATGGTAGT GGTGCAGGAA GTGATGCATT TGACATTACA GTATCTGACA GAATTTCAGA AGTGGTTGAC AAAGAAATAA CCACTGAAAA ACTCTTGGAA AGTAAAAAAT ACGTTGATTA CGCAGTTTAC TTGAAATACA GAGGAAAAAT TAGAATGTAA
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Protein sequence | MKEVGIVGYG SDLPKYRIKA EDIAGAWGKD AQAIKRGLVV NEKSVPGPDE DTATISVQAA RRALSRAGIN PKDIGAVYVG SESHPYAVKP TSGIVAEACG VSPDFTAADL EFACKAGTAG MQMCMGLVGS EMMEYAMAVG ADTAQGAPGD ALEYTAAAGG AAYIIGAKKE EFIAKFNGTY SYTTDTPDFW RREHEHYPKH GGRFTGEPAY FKHVLNGAKG MMAKMDTTAK DYDYCVFHQP NGKFYISAAK QLGFTEEQYK YGLLTPYLGN TYSGAVPLGL SNILDHAKAD DRIFVVSYGS GAGSDAFDIT VSDRISEVVD KEITTEKLLE SKKYVDYAVY LKYRGKIRM
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