Gene MmarC5_0371 details

Gene Information

• Locus tag: MmarC5_0371
• ID: 4928469
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Methanococcus maripaludis C5
• Kingdom: Archaea
• Replicon accession: NC_009135
• Strand: +
• Start bp: 330628
• End bp: 332637
• Gene Length: 2010 bp
• Protein Length: 669 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640165876
• Product: DNA repair helicase RAD3
• Protein accession: YP_001096902
• Protein GI: 134045416
• COG category: [K] Transcription; [L] Replication, recombination and repair
• COG ID: [COG1199] Rad3-related DNA helicases

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATTTTT ACGAATTTAA AGAATATTCC AAAGAAAAAT TTCCTTATCA TGGAATGAGG 
TCCCAGCAAG AAGTTTTAAT GGGAAAAATT TTCGAATGTG TAACTAATAA GAAAAACCTT 
GTAGTTGAAG CCCCAACTGG TGTTGGAAAG ACTTTATCTT ACTTAATTCC TGCATTATAC 
TTTGCAGAGC GTGGAAAACG GGTAATGATT CTTACGGAAA CGATTGATCA GCAAGAAAGA 
ATCGTAGAAG ATCTAACTTC ATTAAAACAC AATTTAAAAG TATCTTTTAT GATGGGGAAG 
GGTAATTTTT TCTGTAAATC AAAAGGGGAT AAAGCAAACA CGCTTTACTG TCAATTAAAC 
AAGGGATGTA TTTACCGGCC AAACAAAAAA CCAGTCTGTG TCTGCGGTAC AAAAAAGGAA 
AAGATCGAAT TTGATGGAAA TACAACATTT TACTGCCCCC TTTGCCTGTG CGATTATCAA 
AAAGCAAAGA TCGAATGTTT TGATGCAAAT ATAATTGTGA TGAACAACAG CATTTACTAC 
TATTTAAAAG ACGAAATCGA CAAAAAGAAG CAAACTGATA TCGTAATTTG TGACGAAGCC 
CATAAATTAG AAGGAAGTAT TAGAAATGCT GCTACAATTG TTATAAATCC AAAATATGCT 
TTAAGAAGAC TTAGATTTAT GGCATACCAC TACTCAAATT CAAGGTTGAG AGTTCACTTT 
GATAGAGTTT CTGAAGAAGA TGACGATACA TTCTGGACAA TCGTTGAAGA TTACATTGTA 
AAAAACGCGG CTGGAAAAGA CTGTAAGAAT TCACTGGTAT TTGATGGATT TAAGATTACT 
TCATTTGGAT TGAAAGAAGA TGTGGCAATT TTGGGTACGC TTCTTGAAGG TTATAATGAA 
ATAGTAAAAA TCAAGGAACG AATTGAAGAT TTAACCGAAA ATGAGGAACT CGATAAAAAA 
GATATGAAAT TTAAAATCGA TAACAAGGCT TTGATTCCAT TGGAGCTTCA ATTTATTGCA 
GATAGGAGAA TTTCTGACGT CCCTCTTGTT GAATTTTTGG AAAATTTGGG CAATCTTAGA 
CATATTACTG GAAATTTTGT AGTTTATAAA AACAACGGAT CGATTCTTTG TGAGCCAGTA 
CTTGTTTCAA CGTATTTAAG TAAACTTTAC GGAGACGCTT CAGTAGTTCA CTGTTCAGCA 
ACACTTGGAG ACTTGAATAT TCATGCAATA AAGACAGGAA TGGGAAAAAG TGAAACACTA 
CTTTTAGACA GTCCTTTTTC AAAAGATAGA AGAAACATAA TTTCGCTCTC CGATGGAGAA 
GATATGAAAT TTAATTCGAT AGATTTCCAG TCAAACAATA AAAAACGAAA TAACGCAAAT 
GAAAATCTGT TTAAAATGGT AAAGGCCGCA AAAGGAAATA CTTTGATACT TTTTAAAAGT 
TTTGGGGATT TAAAAACGGC TCACGAATAC TTTTTGGATG CAGGATATCG TGGAAACATG 
TACTGCTATG AATCCGGAAT GGATGGAAAA GCTGCAAAAA AACTAAAAGA AGACTTTCAA 
AAATATGGGG GCCTTCTTTT AGCAACCGGA AGATTTGCAG AAGGTGTGGA TATCCCTGGA 
GATGCATTAA CCTGTGTTAT AATTGATAGT TTGCCGTTTC CAGTTCCTAC ACCTCTTTTG 
AAAAGAGAAC AAACCCTTCT CGAAGAACGT TTGAAGTCGA GAAAAGTTAA GGATGCTTCA 
TGGAGTGCAT TTTTAATGAC CTCGTTTCAT ATAATGGCAA GAACAGTCAT ACAGATGATT 
GGACGATTAA TCAGAACTGA AACGGATTAT GGTGTTGTTG TTATACAGGA CAAACGATTT 
AACGAATGGG TTGGTTCAGA AATGCTCAAA AGAAAGTATT TAAAAGATAA ATTCATCCCG 
ATGTCTGTCG ATACTGCTGA GGAATACATT CCAAAATTTA TGAAAAAGAT GAAAAAAGAT 
AATTTGAAAA ACAGTTCTTT TTTTAAATAA 

 

Protein sequence

MDFYEFKEYS KEKFPYHGMR SQQEVLMGKI FECVTNKKNL VVEAPTGVGK TLSYLIPALY 
FAERGKRVMI LTETIDQQER IVEDLTSLKH NLKVSFMMGK GNFFCKSKGD KANTLYCQLN 
KGCIYRPNKK PVCVCGTKKE KIEFDGNTTF YCPLCLCDYQ KAKIECFDAN IIVMNNSIYY 
YLKDEIDKKK QTDIVICDEA HKLEGSIRNA ATIVINPKYA LRRLRFMAYH YSNSRLRVHF 
DRVSEEDDDT FWTIVEDYIV KNAAGKDCKN SLVFDGFKIT SFGLKEDVAI LGTLLEGYNE 
IVKIKERIED LTENEELDKK DMKFKIDNKA LIPLELQFIA DRRISDVPLV EFLENLGNLR 
HITGNFVVYK NNGSILCEPV LVSTYLSKLY GDASVVHCSA TLGDLNIHAI KTGMGKSETL 
LLDSPFSKDR RNIISLSDGE DMKFNSIDFQ SNNKKRNNAN ENLFKMVKAA KGNTLILFKS 
FGDLKTAHEY FLDAGYRGNM YCYESGMDGK AAKKLKEDFQ KYGGLLLATG RFAEGVDIPG 
DALTCVIIDS LPFPVPTPLL KREQTLLEER LKSRKVKDAS WSAFLMTSFH IMARTVIQMI 
GRLIRTETDY GVVVIQDKRF NEWVGSEMLK RKYLKDKFIP MSVDTAEEYI PKFMKKMKKD 
NLKNSSFFK