| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0141 |
|---|
| Symbol | |
|---|
| ID | 4927803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 119358 |
|---|
| End bp | 120455 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640165641 |
|---|
| Product | DNA topoisomerase VI subunit A |
|---|
| Protein accession | YP_001096673 |
|---|
| Protein GI | 134045187 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1697] DNA topoisomerase VI, subunit A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGATAACCT CAGAAGAGAG AAATTTAGCG GCCAAAAAAT TATTAAAACT TGCTAATGAT
ATGTATGAAG ACATCATACG AGGAAAAAGA CCTAAAATCA CCTTCCCAAT AAGAAGTCTC
GCCAATGCAA AATTTGATGC TGAAAAAGGA ACTTTTGCGA TACTTGGAAA AGAAAAAGAT
AGGATGTTAA CGGTAAATCA AGCAAAAATA TTTGCCCAAA CTATCAAAAT GATGGAATTT
TCAAAAGAAC TGCTTGATAC AAACGATTTC TCAACCTTGA GAGAAGCTTA TTATGTCTCC
AAAAACTGGG GTGAAGCTAG ATTTGATGAT CAACAGCCAT CAAACGGAGT TATTGAGGAT
ATTGAAGCTG CTTCGGAACA TTTAAGGGAA GATTTAGGAT TCATCCCTGA AGAAGATGGT
GCAGCTGTTA TCGGGCCGTT AAGAATCGCA GATAAAACTG CAGATGGGGA AGAAATTAAA
ATTGACTGTA CTAAACTTGG AAGCGGTGCA TACAACATTC CAAATGATGT TACAAAATTA
GAATTTGAAA CAAAAGCAGA TTTCATTTTA GCAATAGAGA CTGCGGGTAT GTTTGCAAGG
TTAAATGCTG AAGAATTCTG GAAGAAACAC AACTGTATAT TAATCTCTTT AAAAGGTGTT
CCTGCAAGGG CAACTAGAAG ATTTATCAAA AGATTAAATG AAGAACACAA ATTGCCAATT
TTAGTATTTA CGGATGGTGA CCCTTACGGA TACTTAAACA TCTACAGGAC TTTAAAGGTA
GGAAGTGGTA AAGCAGTTCA CCTAGCGGAT AAATTGGCAG TTCCCGAATC TAGACTTATT
GGGGTAACTC CACAAGATAT TGTTGATTAC GAACTTCCAA CCCACCCGCT AAAAGACCAC
GATGTTAAAA GATTAAAAGA TGGTCTTAAA AACGATGACT TCGTTAGATC ATTTCCTGAA
TGGCAGAAAG CATTAAATCA GATGGCTGAC GGTAAAGTAA GGGCAGAACA ACAGTCTTTG
GCAAAATACG GTTTGAAGTA TGTTGTTGAA GAATACTTGC CTGCAAAAAT TGAAGATTCA
AAAACATGGC TTCCATAA
|
|---|
| Protein sequence | MITSEERNLA AKKLLKLAND MYEDIIRGKR PKITFPIRSL ANAKFDAEKG TFAILGKEKD
RMLTVNQAKI FAQTIKMMEF SKELLDTNDF STLREAYYVS KNWGEARFDD QQPSNGVIED
IEAASEHLRE DLGFIPEEDG AAVIGPLRIA DKTADGEEIK IDCTKLGSGA YNIPNDVTKL
EFETKADFIL AIETAGMFAR LNAEEFWKKH NCILISLKGV PARATRRFIK RLNEEHKLPI
LVFTDGDPYG YLNIYRTLKV GSGKAVHLAD KLAVPESRLI GVTPQDIVDY ELPTHPLKDH
DVKRLKDGLK NDDFVRSFPE WQKALNQMAD GKVRAEQQSL AKYGLKYVVE EYLPAKIEDS
KTWLP
|
|---|
| |