Gene Mmar10_2978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2978 
Symbol 
ID4285181 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp3259939 
End bp3260631 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content60% 
IMG OID638142474 
ProductDNA polymerase III, epsilon subunit 
Protein accessionYP_758197 
Protein GI114571517 
COG category[L] Replication, recombination and repair 
COG ID[COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases 
TIGRFAM ID[TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family
[TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGAAA TCGTCTTTGA TACCGAAACC ACCGGTCTTG ATCCCAATAC GGGTGACCGG 
GTCACAGAGC TGGGTTGTGT CGAGATCATT GACTTCATCC CCACTGGCAA GACGTTCCAT
GCCTATGTGA ACCCGCAGCG GTCCGTGCCC AAGGAAGTGG TCGAGATTAC CGGCCTGACC
ACCGAATTCC TGGCTGACAA GCCTCTGTTC GACGAGGTCG GCCCGCAATT TGTGGAATTT
GTCGGGGATG CGACCATGGT CGCCCACAAT GCGCCCTTTG ACCGCGGCTT CATCAATATG
GAGCTGGCCC GGCTGGGTCT GGATATCTAT CCGGATGACC GGTTCAAGGA CACGGCCCGG
ATCGCCAGGG CCAAATTCCC CGGTTCCTAT GTCTCGCTCG ACGCGCTCTG CAAGCGGTTC
GACATCTCCC TGGACACACG GGACAAGCAC GGCGCCCTGA TCGACTCCCT TCTTCTGGCG
GAGGTCTATC TGGAATTGAT GGGTGGCCGG ACGCGGGCGC TGGATCTCAG CGGTCAGGGC
AGTGGCGGCG GTGGCAAGGT TGTTTTTCCG GCGCGATCGC CGCGAGCCGA GCCACTGACG
GGACGCCAGA CAGATTCAGA GCGCGCCGCC CATGCCGCCT TTGTCGACGA GATGGGCGAG
AACGCGCTCT GGAAAAAACT GACGATTCAG TAG
 
Protein sequence
MREIVFDTET TGLDPNTGDR VTELGCVEII DFIPTGKTFH AYVNPQRSVP KEVVEITGLT 
TEFLADKPLF DEVGPQFVEF VGDATMVAHN APFDRGFINM ELARLGLDIY PDDRFKDTAR
IARAKFPGSY VSLDALCKRF DISLDTRDKH GALIDSLLLA EVYLELMGGR TRALDLSGQG
SGGGGKVVFP ARSPRAEPLT GRQTDSERAA HAAFVDEMGE NALWKKLTIQ