Gene Mmar10_2912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2912 
Symbol 
ID4283911 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp3194682 
End bp3195221 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content64% 
IMG OID638142407 
Product2'-5' RNA ligase 
Protein accessionYP_758131 
Protein GI114571451 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1514] 2'-5' RNA ligase 
TIGRFAM ID[TIGR02258] 2'-5' RNA ligase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCTTC GCCTGTTTGC CGCCCTGCCA GTCCCGGACA GCCTGCACGC CGAGATCGCG 
CGTCTGCAGA AAGGCGTTCC AGGGGCCCGC TGGCGTCCGC GGGAGAATTT TCACATCACC
CTGCGCTTCT TCGGGACCGT GGACGAGCGC CAGGCCGAGG ACCTGGACGC GGAACTGGCC
CATATCGCCA TGCCGCCCTT CGATCTGGCG CTTCTGGGAT CCGGATGGTT CGGCAAGCTT
GATCCGCGCG CACTCTGGCT CGGAGTCCGC CCCAGCGAGG CCCTGTCAGA GCTCAACGAA
AAATGCGAAC GGGCGGCGCG CCGTTGCAAG TTGGAACCGG AACACCGCAA CTTCCATCCA
CACATGACGC TGGCATACCT GCAAGGCACC CCGATCGACC GGCTGACCCG GTTCGCCGAA
CGCACCGGCG GCTTTGCCAC CGAGCCATGG CGGGCGACCC ATTTCACGCT TTATTCCAGC
TGGACCTCGC GCGGTGAGAG CAACATCTAT GAAGCCGAGG CGGACTATCC GCTGCTTTGA
 
Protein sequence
MTLRLFAALP VPDSLHAEIA RLQKGVPGAR WRPRENFHIT LRFFGTVDER QAEDLDAELA 
HIAMPPFDLA LLGSGWFGKL DPRALWLGVR PSEALSELNE KCERAARRCK LEPEHRNFHP
HMTLAYLQGT PIDRLTRFAE RTGGFATEPW RATHFTLYSS WTSRGESNIY EAEADYPLL