Gene Mmar10_2809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_2809 
Symbol 
ID4286116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp3096614 
End bp3097549 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID638142304 
Productphage integrase family protein 
Protein accessionYP_758028 
Protein GI114571348 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02224] tyrosine recombinase XerC 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones54 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAC CAGACCTGAA AACGCCCTGG ACCGACGCAC TTGCTGCATT CCTGGCCCAC 
CTGTCCGGCG AGCGGCGACT GTCGCCGCGC ACGCTGGACG CCTACCAGCG CGACCTCGAT
AACTTTGGCG CATTCCTGTG TGAGCATCAC GGGCGCCTGC CCGATCTGAT GACGCTGGGC
GACCTGTCGT CGCGGGACTT TCGAGCCTAT ATGGCGTCGC GCCGCCGGGA CGGATTGTCG
GCAAGGTCAC TTGCCAGGGC GCTATCGGCG ATACGCACAT TCTTTGATTA TGCCAAAAGG
CGGTGGGGGG TCGACAATGC GGCCTTGTCT CTCGTCGAAA GCCCGAAGCT GTTACGTTCA
GCGCCGAAAC CGGTCAGCGA ATCGGCGGCG AAGTCGCTGC TCGCAGAAAC CGGCGCCAGA
GGAGGCCCGG ATTGGGTTTC GGCACGAGAC AATGCCGTTC TCTTGCTATT ATACGGCTGC
GGCCTGCGAA TCTCGGAAGC CCTGAGCCTG ACCGGAAATG ATCTTCCGAT CGGCGATACT
TTGCGCATCG CCGGAAAAGG CAACAAGACG CGAATAGTTC CGGTTCTGCC TGCTGTCGCC
GAGGCCATTT CACAATATGT CGCGCTGTGC CCGTTTGCGA CAAAGGATGA TGCCGCCCTT
TTTCGGGGCG TTCGTGGCGG CAACCTGTCT GCCCGCAGCG TCCAGGCCTT GATGCAGGAA
TTGCGCGGCC GGCTCGGATT GCCCGAAACG GCAACGCCAC ATGCCCTGCG TCATGCCTTC
GCGACACACC TCCTGGCCCA TGGCGGTGAT CTGAGGGCGA TCCAGGAATT GCTAGGACAC
GCCAGCCTCT CCACCACGCA GATCTATGCC GACGTGGAGA GCGCCCGACT CCTCAGCATT
TATGACGGGA CCCACCCGCG CGCGCGTCGG CGGTAA
 
Protein sequence
MAAPDLKTPW TDALAAFLAH LSGERRLSPR TLDAYQRDLD NFGAFLCEHH GRLPDLMTLG 
DLSSRDFRAY MASRRRDGLS ARSLARALSA IRTFFDYAKR RWGVDNAALS LVESPKLLRS
APKPVSESAA KSLLAETGAR GGPDWVSARD NAVLLLLYGC GLRISEALSL TGNDLPIGDT
LRIAGKGNKT RIVPVLPAVA EAISQYVALC PFATKDDAAL FRGVRGGNLS ARSVQALMQE
LRGRLGLPET ATPHALRHAF ATHLLAHGGD LRAIQELLGH ASLSTTQIYA DVESARLLSI
YDGTHPRARR R