| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_2156 |
|---|
| Symbol | |
|---|
| ID | 4284775 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 2353542 |
|---|
| End bp | 2354093 |
|---|
| Gene Length | 552 bp |
|---|
| Protein Length | 183 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638141658 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_757386 |
|---|
| Protein GI | 114570706 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 39 |
|---|
| Fosmid unclonability p-value | 0.287119 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGCACAA TTGGGCTGAC CGTTGATTCC CTTTCGCGAT TGCGAGAATT CATGTCCGGC
AGTTTCGACC GCATCCGCGT TCTCATCGTT GAGGACAATG CGCACATGTC GACCATCCTG
CGCACCATCC TGCAGGGGTT TGGCGTGCGC ACGATCGTGG AAGTGCGCGA CGCGGCTGAT
GCCTTCGAAA CCATGCGCGA TGTCAATCCG GATTTTGCCC TTGTCGACTA CATGCTGGGC
GATCTCAACG GGCTGGAATT CACCCGCCTG GTGCGCACGG CTTCGGACAG TGCCAACAAG
TATCTGCCCA TCGTGATGGT CACCGGTCAT ACCGACCGCT CCAAGGTGAT CGAGGCGATC
AATGCCGGCG TGAACGAATA CCTCGCCAAG CCGGTGCGTC CGGTCGACCT CTTCCATCGG
ATTTCTGCCC TGATCGAGCG GCCGCGCCGC TTCATCAAGG CACCGACCTA TTTCGGTCCC
GACCGCCGTC GTCGCCAGGA TCCGCGCTAT GCCGGGCCGT GGCGCCGCGA GGGCGATGAG
GACAAGGCCT AG
|
|---|
| Protein sequence | MCTIGLTVDS LSRLREFMSG SFDRIRVLIV EDNAHMSTIL RTILQGFGVR TIVEVRDAAD
AFETMRDVNP DFALVDYMLG DLNGLEFTRL VRTASDSANK YLPIVMVTGH TDRSKVIEAI
NAGVNEYLAK PVRPVDLFHR ISALIERPRR FIKAPTYFGP DRRRRQDPRY AGPWRREGDE
DKA
|
|---|
| |