Gene Mmar10_1890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_1890 
Symbol 
ID4286443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp2066828 
End bp2068003 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content63% 
IMG OID638141390 
ProductTonB family protein 
Protein accessionYP_757120 
Protein GI114570440 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGG TTTTGATTGC GTCCCTGACG CTCCTGGCCT CGGCCACCAC GGCGTTGGCT 
CAGGACGAGG CATTGCCGCA AGACGTTGCG TCGGCCTATC TCGACTATCA GGCCGCCCTG
GAAGTGGGTG ATGCCATGGC CCTGCTCGAC GCGGGGCGTC GGGCGTACGA AGCCGGTGAT
GAGGCCGATA TTGATCGCGC CACCTTGGCG ACGCTGGCCG AGAATTACGG TTTTGCCGCG
TCCTTGAACG CTGATTACGA GTCGGCGCAA GAGGCCTGGC GGATAGCGGG GCGCTTGTCC
GACCGTGCCG ATGTCGATCC GGTCGAGCGT GCCTGGCGAT GGCACAATGC GGCACTGGTA
GCCCTGCATA ATCAGGATAG AAATGACGCC TATTCCTGTT CACGCAATGC TGCCAACGCG
TTGGAAGAGC TCGGCGATGA CCTTGGTGCT GCGACTGAAT TCGCTGGCGA TGCCTTCCTG
ACCCGGGCCG CATTGGCTAT TGGCCGGGGC CGGCTCGATG ATGCCGGCGA TGCCGCGGTG
CAATCTGTCG CAGCCTTCGA GGCCAGTCTG GATGCGCCCA GTCAGAGCTA TGCCCTGGCC
CTGTTCTATG CCGGAATCGC GCAGACTCTG GACCGTGAAT TTGAGGACGC GACCTATTCG
CTGCATGTGG CCAGGGATGT GCTGGCTGAG GTCGCGCCCG ACCATGTCGA CACGGCGACC
CTGCGAGCGG CGTATACATC GGCCCGCCTG AACCTGTTCG AGCATGATGA AGTCGGGACC
CGTGAAGCCC TCGACCGGCT TGAGGCCCGA TTGGCGGCTA ATCCCTTCCA CCCCGCCCTG
CCAGCGACTG ACGAGCCGGA TATCGGGTCC GATCCGAACG ATGAATCCGA GCCGGAGGCC
TGCTGCGACG CCGAACCGAT CAGCCGACGC ATGCCCAACT ATCCGCGCGA TGCCGCCTAC
TCGAATCTCG ATGGTGTGGT CTATGTCAGC TTCGACGTGA CCGCGACCGG CCGGACCCGG
AATATCCGCA TTATCGGATC CTTCCCGCCG GCCATTTTTG ATGCGACTTC GGTCAGTGCG
GTTGAGGACT GGCGCTATGA GCCGGCCACG CGCGATGGCG AGCCGGTCCT CAGGGAGGGT
GTGGAAACCC GATTCGACTT TCGCATGCAG CGCTGA
 
Protein sequence
MKQVLIASLT LLASATTALA QDEALPQDVA SAYLDYQAAL EVGDAMALLD AGRRAYEAGD 
EADIDRATLA TLAENYGFAA SLNADYESAQ EAWRIAGRLS DRADVDPVER AWRWHNAALV
ALHNQDRNDA YSCSRNAANA LEELGDDLGA ATEFAGDAFL TRAALAIGRG RLDDAGDAAV
QSVAAFEASL DAPSQSYALA LFYAGIAQTL DREFEDATYS LHVARDVLAE VAPDHVDTAT
LRAAYTSARL NLFEHDEVGT REALDRLEAR LAANPFHPAL PATDEPDIGS DPNDESEPEA
CCDAEPISRR MPNYPRDAAY SNLDGVVYVS FDVTATGRTR NIRIIGSFPP AIFDATSVSA
VEDWRYEPAT RDGEPVLREG VETRFDFRMQ R