| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1688 |
|---|
| Symbol | |
|---|
| ID | 4285691 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1855701 |
|---|
| End bp | 1856966 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638141176 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_756918 |
|---|
| Protein GI | 114570238 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.0910283 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.076767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCTCG CCGCGCACCA TGATCCGGCT TTCCTCGCTG CCTGGCGCCG CGCACCGGCA
CTACCTTTCA CCGGACTGGT TGAAGGTGGG CTGACGCTTC TTTGCCTCTT CCTGTTCTCG
CAAGGCCTGA TCGGCCCGCT CTTCGCCGAT CCCGCTGACC CGGACAGCTC AGTTGTGCTG
CGCCTCATCT GGCTGCCAGT CTATGCCATC ACGCTGGCGC TCGCGGTGAC GCGGCCGGGG
GCCGTGATGC GGACGCTGAC AGGCAATTGG TTGATGGTGG CGCTGGTCCT GTTGACTGCG
GTCTCCGTCA TCTGGTCGAT CGCGCCAGAG ACGACCCTGC GCCGTTCCTT CGCCCTGATC
ATGACCACCC TGTTCGGCTT CTGGATGGCC GCGCGCTGGT CCTGGCGCGG CCTGATCCTT
CTGACTGCGA CAACCTTTGT CGGCCTCGCT GTTGTGTCGA CACTGATGGC GCTGGCCATG
CCGTCCCTGG GTGTTGACCA CGAAGTCCAT GCCGGCGCCT GGAAGGGCGT GTGGTGGGAG
AAGAATACGC TGGGCGCCAT GATGGCCTGG GGGGCGGTGG CCTGTTTTGC GGCGCTGCAT
GTCGATCCCC GACGGCGCTG GATCTGGATG GGCGGGGCGA TCCTGTGTTG CGCCCTGGTC
CTGCTGTCGA CCTCCAAGAC CGCGCTTCTC GCGCTGCTAC TCGGGATTGG CGGCGCTGTC
GGGATCGCGC TGTGCCGGCG CGGCTTCGGC TTTGCCAGCC TGATGCTGTT TCTCGGCCTG
ACCGGCGCGG TTGGTGGTGC CCTGATCCTG TTAATAGCAC CCGTTGAGTT CCTGGAGCTC
CTTGGTCGCG ATGCCACGTT GACCGGCCGG ACGGATATCT GGGCCATCCT GTCGCGCCAG
GCCGCGGAAG TTCCGTGGAC GGGCTATGGC TATATGGCCT TCTGGGCCGA TGAGACAGGG
CCGGTTTACT GGGTCAGGCA GGGCACGGAC TGGCCGGTCC CGACTGCCCA TAATGGCTGG
ATCGAGACGG CGCTGGCGAT CGGCCTGCCG GGTGTCGTGC TGTTGGGTCT GGTCTATGGG
CGCGCAGTAA TGCGGTCCCT TGGACGTTTG TTCCATGGGC CGGAAACCTA TTGGACACTG
ACTTTTCTGG CCATGCTGGG CCTGGTCAGC ATCTCTGAAT CCAACTTCCT TCAGCAGAAT
TCGATCGGCT GGGTCCTGCT CGTCGCGACG GCTGCCAAGT TGGCAGACCG ACGGGCCGGC
GACTAG
|
|---|
| Protein sequence | MSLAAHHDPA FLAAWRRAPA LPFTGLVEGG LTLLCLFLFS QGLIGPLFAD PADPDSSVVL
RLIWLPVYAI TLALAVTRPG AVMRTLTGNW LMVALVLLTA VSVIWSIAPE TTLRRSFALI
MTTLFGFWMA ARWSWRGLIL LTATTFVGLA VVSTLMALAM PSLGVDHEVH AGAWKGVWWE
KNTLGAMMAW GAVACFAALH VDPRRRWIWM GGAILCCALV LLSTSKTALL ALLLGIGGAV
GIALCRRGFG FASLMLFLGL TGAVGGALIL LIAPVEFLEL LGRDATLTGR TDIWAILSRQ
AAEVPWTGYG YMAFWADETG PVYWVRQGTD WPVPTAHNGW IETALAIGLP GVVLLGLVYG
RAVMRSLGRL FHGPETYWTL TFLAMLGLVS ISESNFLQQN SIGWVLLVAT AAKLADRRAG
D
|
|---|
| |