| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1204 |
|---|
| Symbol | |
|---|
| ID | 4284813 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 1315195 |
|---|
| End bp | 1315911 |
|---|
| Gene Length | 717 bp |
|---|
| Protein Length | 238 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638140684 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_756435 |
|---|
| Protein GI | 114569755 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGA CAGATCTTGA CGGCCGCCTC GCTCTCGTCA GCGGGGCGTC GCGCGGTATT
GGCCGCGCCA TGGCGCTCGA ATTGGCCAAG GCCGGTGCCC ATGTCATCGC CACGGCTCGC
ACAACGGGCG GTCTCGAAGA GCTGGACGAT GATATCGTGA AAGCCGGCGG CAGCTGCACC
ATCGTGCCGC TCGACCTGAT GAGCCCGGAC GGGATCGAAA AGCTGGGCGG CGTGATCACC
GAGCGCTGGG AAAAACTGGA CATCCTGCTT GCCAATGCCG GCTCTCTCGG CGTCCTGACC
CCAGCCTCAC AGGTCAAATC CAAGACCTGG CATGATGTGA TTGGCGTCAA CCTGATGGCT
CCGGCCCGCA TGATCCGGGC CTTCGAGCCG CTTCTGCTGG CCTCTGACGC CGGTCGGGCC
GTTTTCATAT CCTCGGGTGC CGCCAGTTCG CGCCGCGCCT TCTGGGCGCC CTATGCGGCG
TCCAAGGCCG CCCTCGACGC GCTGGTCGAG AGCTGGGCCA ATGAACACGT CAACAATCCG
AACATCCGCA TCAACACGGT CTACCCCGGC GCGCTGCGCA CACAGATGCG GTCCAAGGCC
TTCCCCGGCG AAAATCCGGA CACGCTGCCG GAGCCGTCCG CCCTGTGGCC GACGATTGCC
GAGCTGGTGA GCCCGGATTG CACGCGCAAT GGTGAAACCG TCAAATTTGA CGGCTAG
|
|---|
| Protein sequence | MTQTDLDGRL ALVSGASRGI GRAMALELAK AGAHVIATAR TTGGLEELDD DIVKAGGSCT
IVPLDLMSPD GIEKLGGVIT ERWEKLDILL ANAGSLGVLT PASQVKSKTW HDVIGVNLMA
PARMIRAFEP LLLASDAGRA VFISSGAASS RRAFWAPYAA SKAALDALVE SWANEHVNNP
NIRINTVYPG ALRTQMRSKA FPGENPDTLP EPSALWPTIA ELVSPDCTRN GETVKFDG
|
|---|
| |