| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1070 |
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| Symbol | |
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| ID | 4284479 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 1166830 |
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| End bp | 1168407 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638140542 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_756301 |
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| Protein GI | 114569621 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.019749 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGCA ATCTCGCCGA GCGCTGGGCT GAACTTCCGG ACCTTCTCGC CGGACACATG
CTGTTGTCGC TGGCGGCCAT ACTGGTCGGC CTGTCGATCA GCCTGCCGCT TGGAATTCTT
GCGGCGTCCC GACCGCGCCT GGCGGCGGTC GTGCTCAATG CGGCCAGCGT CATCCAGACC
ATTCCCGGCC TTGCCCTGCT GGCATTGATG GTACCGCTTC TTGGCGGGAT GATCGGTTAT
GCGCCAGCCT TCCTGGCGCT GATGCTCTAT TCGATCCTGC CGATCCTGCG CAACACGATT
GTCGGGCTCC AGGGCCTTGA TCCGGTTGTG CGCGAGGCTG CCCGCGGCAT CGGCATGACG
CCGCGTGAAC GGCTGTGGCA GGTCGAGCTG CCGCTGGCCC TGCCGGTCAT TGTCGCCGGA
TTGCGTACGG CGGTGGTGTG GGTGGTTGGC GCGGCGACGC TGGCAACGCC GGTCGGGGCC
TCCAGCCTGG GCAATTACAT CTTTGCCGGC CTGCAGACCC GCAATTGGCT GTCCGTCCTG
TTCGGCTGCC TGTTTGCGGC CGGGCTGGCC ATTGCGCTGG ATCAGATCAT CCGCTTGCTG
GAAGTCGCCG CCCGGGATCG CCGCAAGGGG TTGGCGGTCG CTGTCGGCGT CGCGCTTTCG
GCACTGGTCG TCATCACCAT CGCACCGCGC TATGTGCCGG CCGCTGTGTT CCGAGGGGCG
GGGCCGGTCG TGGCGCTTCA GGACGGTGCC GACACCCTTG CCGATCAGAC TGTTGTGGTC
GGCGCCAAGG CCTTCACCGA GCAATACATT CTCGGTGCCC TGATGCAGAC GCGTCTGGAA
GAGGCCGGGG CCCGCGTCGA CCGGCTCGAC AATCTGGGTT CCACCATCGC CTTCGATGCC
CTGCGCACGG GCGAGATCGA CGTCTATATC GACTATACCG GCACAATCTG GGCGACGGTG
ATGAACCGTT CCGAGCCGAT CAACCGCAAT GCGATGCTCG CCGAGATGAC CGGCTGGCTG
TACGCCGAAC ACGGCATTCT GGCGCTTGGC GGGCTGGGAT TTGAAAACGC CTACGGGTTT
GCCATGGCCC GCGACCGGGC CGAAGCGCTG GGAGTCGACA GTCTCGCCGA CCTTGCTTCC
CAGGCCGAAG GCATGAGTGT CGGAGGCGAT GCGGAGGTCT TTTCGCGGCC CGAATGGGTG
AACACCCGCA ACCGCTACGG CCTCGGGGCG ATGCAAACCC GCGCCATGGA TGCCGCCTTC
ATGTATGGCG CTGTGCGGGA CGGCCAGGTC GACTTGATCT CTGCCTATAC GACTGACGGC
CGCATTGCGG CGTTTGACCT GCTGGTCCTC GCCGATCCAC TGGCGGTGTT GCCGCCCTAT
GACGCGGTGA TCCTTCTGTC GCCCGATGCG GCAGCCAATC CGGCCCTGGT CGAGGCGTTG
TCCGGCCTGA TTGGTGCGAT CGACAGTGAA GCGATGCGTG AGGCCAATCG CCTTGTCGAT
CTGGATCGTC AGACGCCGGA CCAGGCGGCA ATCTGGCTGT CGGACCATTT GCAGGCGGGT
GCGGGAGGCA ATCAATGA
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| Protein sequence | MSSNLAERWA ELPDLLAGHM LLSLAAILVG LSISLPLGIL AASRPRLAAV VLNAASVIQT
IPGLALLALM VPLLGGMIGY APAFLALMLY SILPILRNTI VGLQGLDPVV REAARGIGMT
PRERLWQVEL PLALPVIVAG LRTAVVWVVG AATLATPVGA SSLGNYIFAG LQTRNWLSVL
FGCLFAAGLA IALDQIIRLL EVAARDRRKG LAVAVGVALS ALVVITIAPR YVPAAVFRGA
GPVVALQDGA DTLADQTVVV GAKAFTEQYI LGALMQTRLE EAGARVDRLD NLGSTIAFDA
LRTGEIDVYI DYTGTIWATV MNRSEPINRN AMLAEMTGWL YAEHGILALG GLGFENAYGF
AMARDRAEAL GVDSLADLAS QAEGMSVGGD AEVFSRPEWV NTRNRYGLGA MQTRAMDAAF
MYGAVRDGQV DLISAYTTDG RIAAFDLLVL ADPLAVLPPY DAVILLSPDA AANPALVEAL
SGLIGAIDSE AMREANRLVD LDRQTPDQAA IWLSDHLQAG AGGNQ
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