Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmar10_1069 |
Symbol | |
ID | 4284478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Maricaulis maris MCS10 |
Kingdom | Bacteria |
Replicon accession | NC_008347 |
Strand | + |
Start bp | 1166054 |
End bp | 1166833 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638140541 |
Product | ABC transporter related |
Protein accession | YP_756300 |
Protein GI | 114569620 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0686791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGCGAAG CTGCGCCTCC CGTCCTTGAG GTCCGTGATG TCTCCAAGAC CTATGCGGGC CATGTCGAGG CCGTGCGGGG CGTATCGCTC AGGGTTGAAA AGGGGCAACT CCTTGTCCTT GCGGGCGCAT CCGGGTGCGG CAAGACCAGC CTGCTTAAAA TGATCAACCG CCTCGAGGAA CCCTCGGGCG GTTCGATCAT GTTTGGGGGA GAGGCTGTCG CCAGCCAGGA CGCGGTCGCG CTGCGGCGCC GGATCGGCTG GGTCATGCAG GGCGACGGGC TGTTTCCCCA TATGAGCGTC CGCCGCAATG TCGGGCTGAT CCCCGCCATG GCCGGTCAGG ACGCCGCCCG GATCGAGTTG CGGGTCCGCG AGATGCTGGA CATGGTGCGC CTCGACCCGC ACGAATTCGG TGAGCGTATG CCAGGCGAAC TGTCAGGCGG GCAGCGGCAG CGGGTCGGGT TCGCCCGAGC CTTGGCCGGA AATCCGGAAC TGGTCCTGAT GGACGAGCCG TTCAGCGCCC TCGACCCGAT CACCCGGGAC GGGCTGCAAC AGGATTTCAG GGATTTGCAG CGCGAACTCG GCTTTGCTGC CGTGATGGTC ACCCATGACA TGGCCGAAGC CCTAATCATG GCCGACGAAG TCGCGGTGAT GCGTGACGGC CGCATCATCC AGCAGGGCAC GCCGCACACA TTGATGAGCG CGCCGGCCGA TGATTATGTG TCCGACCTGC TTGAAACGCC GCGCCGCCAG ATGCGGGCCA TCGCGGAGCT GGCGCAGTGA
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Protein sequence | MSEAAPPVLE VRDVSKTYAG HVEAVRGVSL RVEKGQLLVL AGASGCGKTS LLKMINRLEE PSGGSIMFGG EAVASQDAVA LRRRIGWVMQ GDGLFPHMSV RRNVGLIPAM AGQDAARIEL RVREMLDMVR LDPHEFGERM PGELSGGQRQ RVGFARALAG NPELVLMDEP FSALDPITRD GLQQDFRDLQ RELGFAAVMV THDMAEALIM ADEVAVMRDG RIIQQGTPHT LMSAPADDYV SDLLETPRRQ MRAIAELAQ
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