| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_1016 |
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| Symbol | rpsD |
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| ID | 4284356 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Maricaulis maris MCS10 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008347 |
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| Strand | + |
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| Start bp | 1113261 |
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| End bp | 1113878 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 638140487 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_756247 |
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| Protein GI | 114569567 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.0662506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.784633 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAAAGC GTCATTCGCA GAAATACAAA ATTGACCGCC GCATGGGTGA AAACCTGTGG
GGCCGTCCGA AGTCTCCGGT CAATTCGCGC TCCTATGGCC CCGGCCAACA CGGTCAGCGC
CGCAAGACCA AGATGTCCGA TTTCGGTCTT CAGCTCATGG CGAAGCAGAA GCTGAAGGGC
TATTACGGCA ACATCACCGA GAAGCAGTTC CGTCGTACCT ATGACGAAGC TTCGCGCCGT
AAGGGTAACA CCGCCGAGCT GCTGATCGGT CTCCTCGAGA GCCGCCTCGA CGCCATCGTC
TACCGCTGCA AGTTCGTGCC GACGGTTTTC GCATCGCGCC AGTTCGTCAA TCACGGCCAC
GTCAAGGTCA ACGGCATCAA GGTCAACATC CCGTCCTACC GCTGCAAGCC GGGCGATGTG
ATCGAAGTCC GCGAGCGTTC GCGCTCGATG GCTCTGGTCC TGGAAGCCCT GGACAGCCCG
GAACGTGACC TGCCGGAATA CATCGATCTC GATGCCAAGG CGATGAAGGC CACCTTCGTG
CGCATGCCGG AATTCTCTGA AGTGCCGTAC GCGGTGCAGA TGGAACCGAA CCTGGTCATC
GAATTCTACT CCTCGTAA
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| Protein sequence | MSKRHSQKYK IDRRMGENLW GRPKSPVNSR SYGPGQHGQR RKTKMSDFGL QLMAKQKLKG
YYGNITEKQF RRTYDEASRR KGNTAELLIG LLESRLDAIV YRCKFVPTVF ASRQFVNHGH
VKVNGIKVNI PSYRCKPGDV IEVRERSRSM ALVLEALDSP ERDLPEYIDL DAKAMKATFV
RMPEFSEVPY AVQMEPNLVI EFYSS
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