Gene Mmar10_0873 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0873 
Symbol 
ID4285466 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp966595 
End bp967212 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content60% 
IMG OID638140341 
ProductTonB family protein 
Protein accessionYP_756104 
Protein GI114569424 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0810] Periplasmic protein TonB, links inner and outer membranes 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGTT TCATACGTCT CGTTATCGGC GTTCCGGTTG CGGCCATCGT CACGGTGTTC 
CTGTTCTATG TGATGCAGGA CCTCATCAAG GTTGATGAAG TCGATCAGCC TGACGAAGTC
GATGACGTCA CCTTCTCGAT CAATGATGAA GTGGCCGAGG TGGAAGCCCG TGTCCGCGAC
ACCACGATCG ATGATGTGCA ACAGGTCGAC CCGCCACCCC CGCCGCCGCA GATCGAGCGG
CAGCGTGCCG AGCAGCCGTC AGAAGGTCTG GCCACCGTCA TGGGTGCCAT TCCTGACTTC
GAAGCGCCTC AGCTGAACTC GGACAGTGTC AGCTTCTCGG TCTCCGACCG TGACGCACAG
CCGCTGGTCC GGATCGAGCC GCAATACCCG CTTCGTGCGG CAGAGCGCGG GATCGAAGGC
AGCTGCTGGG TCCGTTTCGA TGTGACGCCG GACGGTACGC CGACCAATAT CGACATCTAT
CGTTGCGACA GCTCCTTCTT CGAGCGCGCA TCGAGCCGGG CTGTCGAACG TTGGCGGTAC
AACCCGAAAG TCGAAAATGG TGTTCCTGTC GCCCGTCGTG GCGTGGAAAC CCGCTTCGAC
TTCCGATTGG CCGAATAG
 
Protein sequence
MGSFIRLVIG VPVAAIVTVF LFYVMQDLIK VDEVDQPDEV DDVTFSINDE VAEVEARVRD 
TTIDDVQQVD PPPPPPQIER QRAEQPSEGL ATVMGAIPDF EAPQLNSDSV SFSVSDRDAQ
PLVRIEPQYP LRAAERGIEG SCWVRFDVTP DGTPTNIDIY RCDSSFFERA SSRAVERWRY
NPKVENGVPV ARRGVETRFD FRLAE