Gene Mmar10_0540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0540 
Symbol 
ID4285821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand+ 
Start bp631591 
End bp632196 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content62% 
IMG OID638140005 
Productnegative transcriptional regulator 
Protein accessionYP_755771 
Protein GI114569091 
COG category[K] Transcription 
COG ID[COG2808] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.05365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.138094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACACGC CCACACATTT CCGGATGGAA GACGAGAGCG AGATGCGGGC GGTGATGCGT 
TCGTATGATT TCGGTCTGCT GCTCATTCCG GGTGAGCCGG ATCTGGCGGC GACGCATATC 
CCGTTCAAGC TGGCCGATGA GCGCCTGGTC CTGATCGGCC ATGTCGCCAT GGCCAATCCG 
GCGTCGGCGG CGATCAAGGC GGGCAAGGAG GCTATGGTCG TTTTCACCGG GCCGCATGCC 
TATGTCTCCC CCTCCTGGTA TGCCAAGCCG AACGAGAATG TGCCGACCTG GAATTATGTC 
GCTGTGCATG CCTTTGGTAG GCTGGTGCCG CTCGAGGGTG TCGAGGCCGA GCGGGCGCTG 
TCCTCGCAGA TCGCCGACTT TGAAAGCGAG TGGCGGATCA CCAATCTGGA AGAAAAGCGC 
CGGGCCATGC TGGAGCTGGC CATCCAGCCC TTCGAGTTCG AGATTGACCG CCTGGAGGGC 
AAGGCCAAGC TCTCCCAGAA CAAGCCATTG GAGGAACGCC TGCGCATCGC CCAGGCCCTC 
AACGAACGCG GCGAACACGC CGTCGCTTAC CACATGATCG AGGACGAGGC GGAAGAGGAT 
GATTGA
 
Protein sequence
MYTPTHFRME DESEMRAVMR SYDFGLLLIP GEPDLAATHI PFKLADERLV LIGHVAMANP 
ASAAIKAGKE AMVVFTGPHA YVSPSWYAKP NENVPTWNYV AVHAFGRLVP LEGVEAERAL 
SSQIADFESE WRITNLEEKR RAMLELAIQP FEFEIDRLEG KAKLSQNKPL EERLRIAQAL 
NERGEHAVAY HMIEDEAEED D