Gene Mmar10_0486 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmar10_0486 
Symbol 
ID4285907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMaricaulis maris MCS10 
KingdomBacteria 
Replicon accessionNC_008347 
Strand
Start bp572644 
End bp573456 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content58% 
IMG OID638139950 
ProductABC-2 type transporter 
Protein accessionYP_755717 
Protein GI114569037 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.197916 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAACG CTCACTTAAC TGATTTTCCA CAGCCCAAGA AGTTCGGGTA TTTCAATACC 
TTGGGGCTTT GGACGCTGTA CAAGAAAGAA GTCAGGCGAT TCCTCAAGGT CGGCATGCAG
ACGGTGCTCG CGCCGGTCGC AACGACGCTG CTTTACATGA CCGTTTTCAC GGTCGCGATC
GGGGCACGGC GGGGCGATGT CGGCGGTATT CCCTTCGCTG AATTCCTGGC ACCCGGCCTG
ATCCTGATGG GATTGCTGAA CAACGCCTTT GCCAATTCGG GGTCGTCAAT CCTCGTTTCC
AAGGTGCAGG GCAATACGGT CGACTTCCTG ATGCCGCCAC TGTCGGCTCT GGAATTGTTC
ATCGCCTTCG TCGCCGGCGC CATGACCCGC GGCGTGCTGG TCGCGGTGGT CACCGCGGTA
ACGCTGATCC CCTTCATGAA CATGATGCCG GAGCATTGGT GGGCGGTGCT CTATTTCGGG
CTGAGCGCTG CGGCGATGCT GGCAATGATC GGCGTGATCG GCGGTCTGTG GGCCGAGAAA
TTCGATCACA TGGCCGCGGT TACCACGTTC GTGATCACCC CGCTGACCTT CCTGTCGGGC
ACATTCTACT CGATCACCAA CCTGCCCGGA CCGCTGGCAA CCATCAGTCA TTTCAACCCC
TTCTTCTACA TGATTGACGG CTTTCGCTAT GGATTCACAG GTCATGCCGA CGGCAGTCTG
ATGATCGGGG TGATCCTGCT CGCGCTGATC AACCTTGCGC TCGGTATTCT CAGCTATGCG
TTGTTGCATG CAGGCTGGCG CTTGAAGAGC TGA
 
Protein sequence
MSNAHLTDFP QPKKFGYFNT LGLWTLYKKE VRRFLKVGMQ TVLAPVATTL LYMTVFTVAI 
GARRGDVGGI PFAEFLAPGL ILMGLLNNAF ANSGSSILVS KVQGNTVDFL MPPLSALELF
IAFVAGAMTR GVLVAVVTAV TLIPFMNMMP EHWWAVLYFG LSAAAMLAMI GVIGGLWAEK
FDHMAAVTTF VITPLTFLSG TFYSITNLPG PLATISHFNP FFYMIDGFRY GFTGHADGSL
MIGVILLALI NLALGILSYA LLHAGWRLKS