| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0289 |
|---|
| Symbol | |
|---|
| ID | 4284031 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | - |
|---|
| Start bp | 341174 |
|---|
| End bp | 342892 |
|---|
| Gene Length | 1719 bp |
|---|
| Protein Length | 572 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 638139752 |
|---|
| Product | acetolactate synthase 2 catalytic subunit |
|---|
| Protein accession | YP_755520 |
|---|
| Protein GI | 114568840 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.403033 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 0.363537 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCC TGCCCGCCTC CGAAATCGAC GACACGGCCC CCAGCGCCGC CGCTCGCCCC
TCCCCCCGAC AGACCGGGGC GCATGCGGTG GTACGCACCC TGGAAGCCCT GGGCGTCACC
CGCGTTTTCG GATATCCGGG CGGGGCCATC ATGCCGGTTT ACGACGCCCT GACCGGCTCG
TCCCTGCAAC ACATCCTGGT TCGCCACGAG CAAGCCGCGG CCTTTGCCGC CGATGCCCAG
GCGCGCCTGA CCGGCAAGGC CGGGGTCTGC CTGGCCACTT CCGGGCCTGG CGCCACCAAT
CTGCTGACCG GTATCGCCAA CGCCTATCTG GACAGCGTCC CGATGATCAT CCTGACCGGC
CAGGTGCCGT CAGGCCTGAT GGGCACGGAT GCCTTCCAGG AAGTCGACGT GTTCGGCATG
TCGATGCCCG TCGTCAAACA CTCGATCATC ATCCGCGATC CGCTGAAGAT TCCGGAAATG
ATCGCCGAAG CCTTCGAGAT CGCGGAGAGC GGCCGCCCGG GCCCCGTCCT GATTGATCTG
CCGAAGGATG TCTTACAAGC CGAGGCGTAC CCCACTATAC CCCCCCAGCC TCGGCCTGAG
GCCGGGTCGT CGCATCCACC AGAATCAGAC CTGGCGGCCG CGACGACCCT GCTGGCCCGA
TCAAAGCGCC CCGTCTTCTA TATCGGCGGT GGCGTCACCT TGGGCGGCGC GGTTGAAGCC
GTGCGTGACT TCATGGCCCG CACCGGAATC CCGACGGTTG CGACGCTGAA AGGACTGGGC
TGCCCGCATC CGGACAGCGA AACCTTTCTG GGCATGTTGG GCATGCATGG CGGCCGCGCC
GCCAATGTCG CCGTCGATGA AAGCGACCTC CTGATCTGTT GCGGCGCCCG TTTCGACGAC
CGCGCGACCG GGCGGCTGGA CACATTCGCC CCCGGCGCCC GCATCATCCA TATTGATGGC
GACGCCGCCG AGATCGACAA GTTGCGCCGG GCCGAAATCG GCCTGGCTGG TGACATCTCA
GCCATCCTGG CCGGCATCAC CAATGACTGG CTCGACATCA CCGAATGGCG CGACACCTGT
GTCGAGCGCA AGGAACACCA CGCCTTTCGC TATGATGCGC CCGGTTCGGG CGTTTATGCG
CCTGCCATGC TGAAGCAATT GTCCGAGGCC GCCGGTGATG ATTTCATCGC CGCCTGTGAT
GTCGGCCAGC ATCAGATGTG GGTCGCCCAG CATTGCCGCT TCTCGCGCCC GGAGCACCAT
CTGACCTCCG CCGGGCTGGG CGCCATGGGC TATGGCCTGC CGGCCGGGAT CGGCGCCGCC
ATGACCCGAC CGGACGCCAA GGTCGTCACC ATCACCGGCG ACGGCTCGAT CATGATGAAT
ATCCAGGAGC TGGCGACCGC CCGCCGCTAT GGCGTGCCGG TCAGGATTCT GCTGCTCGAC
AATGCCTCGC TGGGCCTGGT CCGGCAGTGG CAGGAATATT TCTTCGACCA GAATTTCTCC
GAGATCGACC TCTACGACAA TCCCGATTTT GCGGAAGTGG CCCATGCATT CGGCATCGAG
GCCTTCACCG TTCACAGCCG CGAGGAAGTT CCCGCGGCCA TCGACCGCTT GCTGAATGCC
CGCGGCCCGA TCCTCGCGCA TGTCCTGATC GACCCGCGTG AGAATGTCTG GCCGCTGGTC
CCGCCCGGCG CGTCCAATGC CGACATGATG GAGGACTGA
|
|---|
| Protein sequence | MTALPASEID DTAPSAAARP SPRQTGAHAV VRTLEALGVT RVFGYPGGAI MPVYDALTGS
SLQHILVRHE QAAAFAADAQ ARLTGKAGVC LATSGPGATN LLTGIANAYL DSVPMIILTG
QVPSGLMGTD AFQEVDVFGM SMPVVKHSII IRDPLKIPEM IAEAFEIAES GRPGPVLIDL
PKDVLQAEAY PTIPPQPRPE AGSSHPPESD LAAATTLLAR SKRPVFYIGG GVTLGGAVEA
VRDFMARTGI PTVATLKGLG CPHPDSETFL GMLGMHGGRA ANVAVDESDL LICCGARFDD
RATGRLDTFA PGARIIHIDG DAAEIDKLRR AEIGLAGDIS AILAGITNDW LDITEWRDTC
VERKEHHAFR YDAPGSGVYA PAMLKQLSEA AGDDFIAACD VGQHQMWVAQ HCRFSRPEHH
LTSAGLGAMG YGLPAGIGAA MTRPDAKVVT ITGDGSIMMN IQELATARRY GVPVRILLLD
NASLGLVRQW QEYFFDQNFS EIDLYDNPDF AEVAHAFGIE AFTVHSREEV PAAIDRLLNA
RGPILAHVLI DPRENVWPLV PPGASNADMM ED
|
|---|
| |