| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmar10_0259 |
|---|
| Symbol | |
|---|
| ID | 4284123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Maricaulis maris MCS10 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008347 |
|---|
| Strand | + |
|---|
| Start bp | 299147 |
|---|
| End bp | 299899 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638139722 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_755490 |
|---|
| Protein GI | 114568810 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 68 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTCG CCGGAAAAAC CGCGATTGTT GTTGGTGGTG GCCGTGATAT CGGGCGTGCC
GTCTCGATCA GCCTGGCCCG CGAAGGCGCC AAGGTGGTCG TCAATTTCAA CAATGATGAA
GCCGCCGCCC AAGCGACAGT TGATGATATT ACCAAGGCTG GCGGCGACGC CATCCTGGTC
AAGGCTGATG CGACCAAATT CGCCGAGATG GAAGCGCTCG TGGCGTCAGC CCAAAGCGCC
TTCGGCCCGC AAATCGACAT TCTCGCGACT GTCGCCGGCG GCATGGTGGC CCGCAAGACC
CTCGCCGAAA TGGACGAGGA GTTTTTTGAC TTCGTCATGA GGCTCAATGT GCACTCGGCA
TTCTTCGCGA TGAAAGCGAC CGTGCCGCAC ATGAAGGAAG GGGCGTCGAT CATCAACTTT
TCCTCCCAGG CTGGCCGTGA TGGCGGGGGG CCCGGTGCTA CCGCCTACGC GACGGGCAAG
GGCGCCGTCA TGACATTCAC CCGCGGCATG GCCAAGGAGC TTGGCCCGAA CGGAATTCGG
GTCAACGCCG TGTGCCCGGG CATGATTGCC ACCAGCTTCC ATGACCGTTT CTCGAAGGAT
GAAGTGCGCG AGAAGGTGGC CGGCATGACG CCGCTTCGTC GCCAGGGTGC AGCCGAGGAA
GTGGGCGATG TGGTCAGCTA TCTGGCCTCG GATGAAGCTT CCTTCCTGAC GGGCGTTTGC
CTCGACGTGA ATGGCGGTTT GCTGTTCTCC TAG
|
|---|
| Protein sequence | MKLAGKTAIV VGGGRDIGRA VSISLAREGA KVVVNFNNDE AAAQATVDDI TKAGGDAILV
KADATKFAEM EALVASAQSA FGPQIDILAT VAGGMVARKT LAEMDEEFFD FVMRLNVHSA
FFAMKATVPH MKEGASIINF SSQAGRDGGG PGATAYATGK GAVMTFTRGM AKELGPNGIR
VNAVCPGMIA TSFHDRFSKD EVREKVAGMT PLRRQGAAEE VGDVVSYLAS DEASFLTGVC
LDVNGGLLFS
|
|---|
| |